RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 NCAM2O15394 837 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 GLRA3O75311 464 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 F9P00740 461 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 TPBGLP0DKB5 382 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 GNAZP19086 355 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 CD52P31358 61 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 GP5P40197 560 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 ABCG1P45844 678 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 KHDC1Q4VXA5 237 aaKnown RBP15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 SPANXN3Q5MJ09 141 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 TEDDM1Q5T9Z0 273 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 FAM91A1Q658Y4 838 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 PM20D1Q6GTS8 502 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 MRPL10Q7Z7H8 261 aaKnown RBP15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 OR10T2Q8NGX3 314 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 SCAMP5Q8TAC9 235 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 NUDCD1Q96RS6 583 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 GBA3Q9H227 469 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 LRRC40Q9H9A6 602 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 PPARGC1AQ9UBK2 798 aaKnown RBP15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 DCDC2Q9UHG0 476 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 PADI3Q9ULW8 664 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 RAD54BQ9Y620 910 aa15.69■□□□□ 0.1
CACNA1E-208ENST00000533229 H0Y3Z8 333 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 ATP9BO43861 1147 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 PROCP04070 461 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 TPH1P17752 444 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 PCSK1P29120 753 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 TYK2P29597 1187 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 RPL9P32969 192 aaKnown RBP15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 PGFP49763 221 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 NAB1Q13506 487 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 WASHC2DQ5SRD0 308 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 RSPH3Q86UC2 560 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 IFNL1Q8IU54 200 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 C10orf107Q8IVU9 208 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 PLD6Q8N2A8 252 aaKnown RBP15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 DCLK2Q8N568 766 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 SOCS4Q8WXH5 440 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 ZNF570Q96NI8 536 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 CHRAC1Q9NRG0 131 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 SNX15Q9NRS6 342 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 MANSC4A6NHS7 340 aaPredicted RBP15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 JCHAINP01591 159 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 ITGB1P05556 798 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 SRGAP2BP0DMP2 458 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 ANKRD20A4Q4UJ75 823 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 HSP90AA5PQ58FG0 334 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 FSTL4Q6MZW2 842 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 ARHGAP36Q6ZRI8 547 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 STRA8Q7Z7C7 330 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 CNTD1Q8N815 330 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 ACVR1CQ8NER5 493 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 PPP1R14CQ8TAE6 165 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 DQX1Q8TE96 717 aaKnown RBP15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 ZNF419Q96HQ0 510 aaPredicted RBP15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 TEKT5Q96M29 485 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 PKMYT1Q99640 499 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 CPNE1Q99829 537 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 ACBD6Q9BR61 282 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 WWP1Q9H0M0 922 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 BFARQ9NZS9 450 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 TXNDC16Q9P2K2 825 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 NEU3Q9UQ49 428 aa15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 MRPL42Q9Y6G3 142 aaKnown RBP15.68■□□□□ 0.1
CACNA1E-208ENST00000533229 GPR182O15218 404 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 USP1O94782 785 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 ENO1P06733 434 aaKnown RBP15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 CYBAP13498 195 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 SLC1A6P48664 564 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 CCNG1P51959 295 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 ALDH18A1P54886 795 aaKnown RBP15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 DLG2Q15700 870 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 INTS6LQ5JSJ4 861 aaKnown RBP15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 GRTP1Q5TC63 336 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 OTOP3Q7RTS5 596 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 SMC1BQ8NDV3 1235 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 TRIB2Q92519 343 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 ATP2A3Q93084 1043 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 RBBP8Q99708 897 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 EPAS1Q99814 870 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 CCDC106Q9BWC9 280 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 CAB39LQ9H9S4 337 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 RRN3Q9NYV6 651 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 DNAJC16Q9Y2G8 782 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 HTTP42858 3142 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 ARHGAP42A6NI28 874 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 GOLGA8TH3BQL2 631 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 ODC1P11926 461 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 MX2P20592 715 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 THPOP40225 353 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 MAGEA12P43365 314 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 CDK18Q07002 472 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 TRIM32Q13049 653 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 TUBB3Q13509 450 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 EIF4EBP2Q13542 120 aaPredicted RBP15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 DCLRE1AQ6PJP8 1040 aa15.67■□□□□ 0.1
CACNA1E-208ENST00000533229 MAVSQ7Z434 540 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms