RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 DNALI1O14645 258 aaPredicted RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 ACSL4O60488 711 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 PRAMEF12O95522 483 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 TGM2P21980 687 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 EPHB2P29323 1055 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 ATP5OP48047 213 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 SLC11A2P49281 568 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 GBE1Q04446 702 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 ZNF844Q08AG5 666 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 ATAT1Q5SQI0 421 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 CES5AQ6NT32 575 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 RWDD4Q6NW29 188 aaKnown RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 DARS2Q6PI48 645 aaKnown RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 GET4Q7L5D6 327 aaPredicted RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 GOLGA6L1Q8N7Z2 621 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 MYLIPQ8WY64 445 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 USP13Q92995 863 aaPredicted RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 PABPC5Q96DU9 382 aaKnown RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 PABPC3Q9H361 631 aaKnown RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 ARHGEF4Q9NR80 690 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 ETNK2Q9NVF9 386 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 RCOR3Q9P2K3 495 aaPredicted RBP19.01■□□□□ 0.63
SMPD1-208ENST00000533123 ARHGAP26Q9UNA1 814 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 CLUHO75153 1309 aa19.01■□□□□ 0.63
SMPD1-208ENST00000533123 ZNF487B1APH4 448 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 E9PAM4 449 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 LEFTY2O00292 366 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 OPA1O60313 960 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 GREM1O60565 184 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 SLC20A2Q08357 652 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 CCDC85BQ15834 202 aaPredicted RBP19■□□□□ 0.63
SMPD1-208ENST00000533123 ARTNQ5T4W7 220 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 ARID3BQ8IVW6 561 aaPredicted RBP19■□□□□ 0.63
SMPD1-208ENST00000533123 BBOF1Q8ND07 529 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 FGF13Q92913 245 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 TDP1Q9NUW8 608 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 SOBPA7XYQ1 873 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 SHBGP04278 402 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 SLC6A4P31645 630 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 CAV1Q03135 178 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 SLC10A2Q12908 348 aaPredicted RBP19■□□□□ 0.63
SMPD1-208ENST00000533123 DPYSQ14117 519 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 FAM133BQ5BKY9 247 aaKnown RBP19■□□□□ 0.63
SMPD1-208ENST00000533123 MANEALQ5VSG8 457 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 RFWD3Q6PCD5 774 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 CHSY1Q86X52 802 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 NPAS3Q8IXF0 933 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 RIN3Q8TB24 985 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 ZSCAN18Q8TBC5 510 aaPredicted RBP19■□□□□ 0.63
SMPD1-208ENST00000533123 SH3RF2Q8TEC5 729 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 MYEOVQ96EZ4 313 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 CDX2Q99626 313 aaPredicted RBP19■□□□□ 0.63
SMPD1-208ENST00000533123 PRMT1Q99873 361 aaKnown RBP19■□□□□ 0.63
SMPD1-208ENST00000533123 NEU3Q9UQ49 428 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 SH3BP1Q9Y3L3 701 aa19■□□□□ 0.63
SMPD1-208ENST00000533123 RPL22P35268 128 aaKnown RBP18.99■□□□□ 0.63
SMPD1-208ENST00000533123 COL19A1Q14993 1142 aa18.99■□□□□ 0.63
SMPD1-208ENST00000533123 SLMAPQ14BN4 828 aa18.99■□□□□ 0.63
SMPD1-208ENST00000533123 NCBP2-AS2Q69YL0 99 aa18.99■□□□□ 0.63
SMPD1-208ENST00000533123 FBXL22Q6P050 247 aa18.99■□□□□ 0.63
SMPD1-208ENST00000533123 LRIG3Q6UXM1 1119 aa18.99■□□□□ 0.63
SMPD1-208ENST00000533123 NETO2Q8NC67 525 aa18.99■□□□□ 0.63
SMPD1-208ENST00000533123 UHMK1Q8TAS1 419 aaKnown RBP18.99■□□□□ 0.63
SMPD1-208ENST00000533123 MSLNLQ96KJ4 702 aa18.99■□□□□ 0.63
SMPD1-208ENST00000533123 MPP6Q9NZW5 540 aa18.99■□□□□ 0.63
SMPD1-208ENST00000533123 ADAM21Q9UKJ8 722 aa18.99■□□□□ 0.63
SMPD1-208ENST00000533123 TPX2Q9ULW0 747 aaKnown RBP18.99■□□□□ 0.63
SMPD1-208ENST00000533123 TRDMT1O14717 391 aaKnown RBP18.98■□□□□ 0.63
SMPD1-208ENST00000533123 ERCC2P18074 760 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 TACR2P21452 398 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 HCAR3P49019 387 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 IRAK1P51617 712 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 RNASEH2BQ5TBB1 312 aaKnown RBP18.98■□□□□ 0.63
SMPD1-208ENST00000533123 ZNF683Q8IZ20 524 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 IGSF8Q969P0 613 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 EXOC4Q96A65 974 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 AZIN2Q96A70 460 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 CDC42EP4Q9H3Q1 356 aaKnown RBP18.98■□□□□ 0.63
SMPD1-208ENST00000533123 PSD3Q9NYI0 1048 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 ZMYM5Q9UJ78 669 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 NRG1Q02297 640 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-208ENST00000533123 MTA1Q13330 715 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 SLC29A2Q14542 456 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 SPDYCQ5MJ68 293 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 ADGRF1Q5T601 910 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 KCTD16Q68DU8 428 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 LRRC31Q6UY01 552 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 Q6ZNB5 142 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 ST13P5Q8NFI4 369 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-208ENST00000533123 TBC1D31Q96DN5 1066 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 USP29Q9HBJ7 922 aa18.98■□□□□ 0.63
SMPD1-208ENST00000533123 LSM7Q9UK45 103 aaKnown RBP18.98■□□□□ 0.63
SMPD1-208ENST00000533123 HELZP42694 1942 aaKnown RBP18.97■□□□□ 0.63
SMPD1-208ENST00000533123 RIPK2O43353 540 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 RBL1P28749 1068 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 ZNF135P52742 658 aaPredicted RBP18.97■□□□□ 0.63
SMPD1-208ENST00000533123 DENND2CQ68D51 928 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 HTR3DQ70Z44 454 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 LGI2Q8N0V4 545 aa18.97■□□□□ 0.63
SMPD1-208ENST00000533123 SH2D3CQ8N5H7 860 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms