RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 C1QTNF3-AMACRE9PGA6 284 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 M0QYV0 167 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 PIK3R2O00459 728 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 SLC16A3O15427 465 aaKnown RBP11.94□□□□□ -0.5
CMTM1-216ENST00000533078 C1QL1O75973 258 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
CMTM1-216ENST00000533078 PAEPP09466 180 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 ZNF18P17022 549 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 ACP1P24666 158 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 TMPRSS3P57727 454 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 CCDC15Q0P6D6 951 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 CETN1Q12798 172 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 BNIP3Q12983 259 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 KCNJ12Q14500 433 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 MS4A13Q5J8X5 152 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 SFMBT2Q5VUG0 894 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 TMEM270Q6UE05 265 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 KDM7AQ6ZMT4 941 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 CHSY1Q86X52 802 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 CFAP52Q8N1V2 620 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 ZNF843Q8N446 348 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 AADATQ8N5Z0 425 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 RFFLQ8WZ73 363 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 OR8D1Q8WZ84 308 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 RNF34Q969K3 372 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 FAM149B1Q96BN6 582 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 MRGPRX3Q96LB0 322 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 HSFY1Q96LI6 401 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 SPATA32Q96LK8 384 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 PRICKLE1Q96MT3 831 aaPredicted RBP11.94□□□□□ -0.5
CMTM1-216ENST00000533078 ZNF578Q96N58 590 aaPredicted RBP11.94□□□□□ -0.5
CMTM1-216ENST00000533078 MIS12Q9H081 205 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 NUCKS1Q9H1E3 243 aaKnown RBP11.94□□□□□ -0.5
CMTM1-216ENST00000533078 EBF2Q9HAK2 575 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 SLC25A13Q9UJS0 675 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 PCDHB4Q9Y5E5 795 aa11.94□□□□□ -0.5
CMTM1-216ENST00000533078 ZNF462Q96JM2 2506 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 F5H5T6 163 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 PRAMEF26H0Y7S4 382 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 J3QKU1 62 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 LATO43561 262 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 MT-CO3P00414 261 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 MAT2AP31153 395 aaKnown RBP11.93□□□□□ -0.5
CMTM1-216ENST00000533078 CTSOP43234 321 aaPredicted RBP11.93□□□□□ -0.5
CMTM1-216ENST00000533078 KRT85P78386 507 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 INSM1Q01101 510 aaPredicted RBP11.93□□□□□ -0.5
CMTM1-216ENST00000533078 RHDQ02161 417 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 TLE3Q04726 772 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 KCNH2Q12809 1159 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 DPYDQ12882 1025 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 LRMPQ12912 555 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 ZNF211Q13398 564 aaPredicted RBP11.93□□□□□ -0.5
CMTM1-216ENST00000533078 ACCSLQ4AC99 568 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 CBWD6Q4V339 395 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 DCAF6Q58WW2 860 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 CBWD3Q5JTY5 395 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 CBWD5Q5RIA9 395 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 TTC39BQ5VTQ0 682 aaPredicted RBP11.93□□□□□ -0.5
CMTM1-216ENST00000533078 MMS22LQ6ZRQ5 1243 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 SPACA3Q8IXA5 215 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 LGI2Q8N0V4 545 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 DCBLD1Q8N8Z6 715 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 SLC35F5Q8WV83 523 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 LMLNQ96KR4 655 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 RPL10LQ96L21 214 aaKnown RBP11.93□□□□□ -0.5
CMTM1-216ENST00000533078 NT5C1BQ96P26 610 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 DEPDC7Q96QD5 511 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 FAM129BQ96TA1 746 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 ST7Q9NRC1 585 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 RMND1Q9NWS8 449 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 CYTH4Q9UIA0 394 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 INTS6Q9UL03 887 aaKnown RBP11.93□□□□□ -0.5
CMTM1-216ENST00000533078 HPSEQ9Y251 543 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 COQ4Q9Y3A0 265 aa11.93□□□□□ -0.5
CMTM1-216ENST00000533078 FARP1Q9Y4F1 1045 aaPredicted RBP11.93□□□□□ -0.5
CMTM1-216ENST00000533078 CFAP46Q8IYW2 2715 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 RNGTTO60942 597 aaKnown RBP11.92□□□□□ -0.5
CMTM1-216ENST00000533078 SDC3O75056 442 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 ACADSBP45954 432 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 DUSP3P51452 185 aaPredicted RBP11.92□□□□□ -0.5
CMTM1-216ENST00000533078 PPP2CBP62714 309 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 PPP2CAP67775 309 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 FKBP3Q00688 224 aaKnown RBP11.92□□□□□ -0.5
CMTM1-216ENST00000533078 CNGA2Q16280 664 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 ZCWPW2Q504Y3 356 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 FSCBQ5H9T9 825 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 RABGAP1LQ5R372 815 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 NADSYN1Q6IA69 706 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 PMF1Q6P1K2 205 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 TRIM69Q86WT6 500 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 PPM1KQ8N3J5 372 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 ATP6V0D2Q8N8Y2 350 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 DQX1Q8TE96 717 aaKnown RBP11.92□□□□□ -0.5
CMTM1-216ENST00000533078 PTPRN2Q92932 1015 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 KLHDC7BQ96G42 594 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 NAF1Q96HR8 494 aaKnown RBP11.92□□□□□ -0.5
CMTM1-216ENST00000533078 BTN2A3PQ96KV6 586 aa11.92□□□□□ -0.5
CMTM1-216ENST00000533078 FCRL2Q96LA5 508 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms