RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 TMEM169Q96HH4 297 aa7.74□□□□□ -1.17
CTNND1-233ENST00000532787 RNF145Q96MT1 663 aa7.74□□□□□ -1.17
CTNND1-233ENST00000532787 CBWD1Q9BRT8 395 aa7.74□□□□□ -1.17
CTNND1-233ENST00000532787 TMEM106CQ9BVX2 250 aa7.74□□□□□ -1.17
CTNND1-233ENST00000532787 AGXT2Q9BYV1 514 aa7.74□□□□□ -1.17
CTNND1-233ENST00000532787 IL22Q9GZX6 179 aa7.74□□□□□ -1.17
CTNND1-233ENST00000532787 LRMDAQ9H2I8 198 aa7.74□□□□□ -1.17
CTNND1-233ENST00000532787 PCYOX1Q9UHG3 505 aa7.74□□□□□ -1.17
CTNND1-233ENST00000532787 VPS28Q9UK41 221 aa7.74□□□□□ -1.17
CTNND1-233ENST00000532787 PNMA8BQ9ULN7 279 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-233ENST00000532787 PCDHGC5Q9Y5F6 944 aa7.74□□□□□ -1.17
CTNND1-233ENST00000532787 LMTK2Q8IWU2 1503 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 KPNA5O15131 536 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 SYNCRIPO60506 623 aaKnown RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 SMNDC1O75940 238 aaKnown RBP eCLIP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 RPL5P46777 297 aaKnown RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TOB1P50616 345 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TRAP1Q12931 704 aaKnown RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 CYP2A13Q16696 494 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 ALFQ53S48 1182 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 FBXO47Q5MNV8 452 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TAS1R2Q8TE23 839 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 MYLPFQ96A32 169 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TMEM159Q96B96 161 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 NUAK2Q9H093 628 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TRPC4Q9UBN4 977 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 PRPF19Q9UMS4 504 aaKnown RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 GTF2A1LQ9UNN4 478 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 MFHAS1Q9Y4C4 1052 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 PCDHA11Q9Y5I1 949 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 CCDC189A1A4V9 331 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 UBE2QL1A1L167 161 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 RBAK-RBAKDNI3L0D1 243 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 PSMD12O00232 456 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TRIM38O00635 465 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 KLHL18O94889 574 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 UNC5CO95185 931 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 MLYCDO95822 493 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 HMGCRP04035 888 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 NFICP08651 508 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 VAV1P15498 845 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 PECAM1P16284 738 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 PCSK2P16519 638 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 ZNF24P17028 368 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 DGKAP23743 735 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 NOS3P29474 1203 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 PRKCIP41743 596 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 CASP4P49662 377 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 ALDH5A1P51649 535 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TKTL1P51854 596 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 GTF2A2P52657 109 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 NME5P56597 212 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 ERVK-9P63128 1117 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 EZH2Q15910 746 aaKnown RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 FOXR2Q6PJQ5 311 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 ETNPPLQ8TBG4 499 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TATDN2Q93075 761 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 SMARCD1Q96GM5 515 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TEKT5Q96M29 485 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 CDRT15Q96T59 188 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 SEPHS2Q99611 448 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 OSBPL11Q9BXB4 747 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 RIBC2Q9H4K1 309 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 POMKQ9H5K3 350 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 MYOZ2Q9NPC6 264 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 CLN6Q9NWW5 311 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 LEF1Q9UJU2 399 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 C3orf18Q9UK00 162 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 DNPEPQ9ULA0 475 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 CRYL1Q9Y2S2 319 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 SLIT1O75093 1534 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 SLC12A8A0AV02 714 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 WDR27A2RRH5 827 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 RAMP2O60895 175 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 SEC22BO75396 215 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 STAU1O95793 577 aaKnown RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 CCDC130P13994 396 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 ITGAXP20702 1163 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 OAZ1P54368 228 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 FCGRTP55899 365 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 BMPR2Q13873 1038 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 NEDD8Q15843 81 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TMC7Q7Z402 723 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 SLC44A2Q8IWA5 706 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 RP9Q8TA86 221 aaKnown RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 ATG4CQ96DT6 458 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 PXMP2Q9NR77 195 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TFR2Q9UP52 801 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 FRMPD4Q14CM0 1322 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 RGS20O76081 388 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 LRPAP1P30533 357 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 FLT3P36888 993 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 CAP2P40123 477 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 HNMTP50135 292 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 ZNF846Q147U1 533 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 CTXN3Q4LDR2 81 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 TCHHL1Q5QJ38 904 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-233ENST00000532787 SV2AQ7L0J3 742 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 C11orf74Q86VG3 221 aa7.73□□□□□ -1.17
CTNND1-233ENST00000532787 ZNF410Q86VK4 478 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms