RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 BICDL2A1A5D9 508 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 CILPO75339 1184 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 P4HA1P13674 534 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 ENGP17813 658 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 AVPR1AP37288 418 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 PPP1R2P41236 205 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 LIG3P49916 1009 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 RAD23BP54727 409 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 MAP3K7CLP57077 242 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 APBA1Q02410 837 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 INCA1Q0VD86 236 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 MESP2Q0VG99 397 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 IFRD2Q12894 506 aaPredicted RBP7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 USP39Q53GS9 565 aaKnown RBP7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 FOXR2Q6PJQ5 311 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 DENND5BQ6ZUT9 1274 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 PIP4P1Q86T03 277 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 UNC93AQ86WB7 457 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 DEFB119Q8N690 84 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 ARL14EPQ8N8R7 260 aaPredicted RBP7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 PNPLA1Q8N8W4 532 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 MLKLQ8NB16 471 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 SLC4A11Q8NBS3 891 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 MDGA1Q8NFP4 955 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 SLC2A14Q8TDB8 520 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 HNRNPLLQ8WVV9 542 aaKnown RBP7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 KAT5Q92993 513 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 CYFIP2Q96F07 1278 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 TRMT2BQ96GJ1 504 aaKnown RBP7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 PLPPR2Q96GM1 343 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 TNIP3Q96KP6 325 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 SPATA17Q96L03 361 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 C8orf48Q96LL4 319 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 CAMK1GQ96NX5 476 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 MED10Q9BTT4 135 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 RNF38Q9H0F5 515 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 LINC00597Q9H2U6 94 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 ECT2Q9H8V3 914 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 CYP3A43Q9HB55 503 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 METTL14Q9HCE5 456 aaKnown RBP7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 ZNF462Q96JM2 2506 aa7.36□□□□□ -1.23
TRIM53CP-201ENST00000531490 SPAG17Q6Q759 2223 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 HHLA1C9JL84 531 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 SCAMP3O14828 347 aaKnown RBP7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 STX10O60499 249 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 FGF19O95750 216 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 ADORA2BP29275 332 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 CDC25CP30307 473 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 ST13P50502 369 aaKnown RBP7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 TAF10Q12962 218 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 SEPT6Q14141 434 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 MTF1Q14872 753 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 CC2D1AQ6P1N0 951 aaPredicted RBP7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 RRAGAQ7L523 313 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 GPRIN1Q7Z2K8 1008 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 MON1AQ86VX9 555 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 MARCH9Q86YJ5 346 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 ARHGEF19Q8IW93 802 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 NUP93Q8N1F7 819 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 USP33Q8TEY7 942 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 CD101Q93033 1021 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 CRELD1Q96HD1 420 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 TMEM176AQ96HP8 235 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 HEXIM2Q96MH2 286 aaKnown RBP7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 GCNAQ96QF7 691 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 HNRNPABQ99729 332 aaKnown RBP7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 CRACR2AQ9BSW2 395 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 GTPBP2Q9BX10 602 aaKnown RBP7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 NT5C1AQ9BXI3 368 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 IMPG2Q9BZV3 1241 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 SLC32A1Q9H598 525 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 CSNK1G1Q9HCP0 422 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 TRPC7Q9HCX4 862 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 SAMSN1Q9NSI8 373 aaKnown RBP7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 TDP1Q9NUW8 608 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 DUS2Q9NX74 493 aaKnown RBP7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 GCNT4Q9P109 453 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 HECTD1Q9ULT8 2610 aa7.35□□□□□ -1.23
TRIM53CP-201ENST00000531490 PRAMEF27A3QJZ7 478 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 ZNF840PA6NDX5 716 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 CYSRT1A8MQ03 144 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 K7EQS6 105 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 TULP2O00295 520 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 PMM2O15305 246 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 PRB1P04280 392 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 CFIP05156 583 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 HDCP19113 662 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 SLC9A1P19634 815 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 ACO1P21399 889 aaKnown RBP7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 ANXA13P27216 316 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 YWHAQP27348 245 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 SEMA3BQ13214 749 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 CUL2Q13617 745 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 PDGFRLQ15198 375 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 FBXO43Q4G163 708 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 EMC10Q5UCC4 262 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 GJB7Q6PEY0 223 aa7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 RBM43Q6ZSC3 357 aaKnown RBP7.34□□□□□ -1.23
TRIM53CP-201ENST00000531490 CLEC20AQ6ZU45 233 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms