RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 APOLD1Q96LR9 279 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 OMDQ99983 421 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 XYLT2Q9H1B5 865 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 SLC25A18Q9H1K4 315 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 ZFAND3Q9H8U3 227 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 USP29Q9HBJ7 922 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 FAM49BQ9NUQ9 324 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 HMGXB4Q9UGU5 601 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 SUN2Q9UH99 717 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 DOLKQ9UPQ8 538 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 CENPEQ02224 2701 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 ZNF233A6NK53 670 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 RNASEH1O60930 286 aaKnown RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 PIAS2O75928 621 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 TNFSF15O95150 251 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 GJB6O95452 261 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 CST3P01034 146 aaPredicted RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 CENPBP07199 599 aaPredicted RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 DLATP10515 647 aaKnown RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 ALPPL2P10696 532 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 RALAP11233 206 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 GAP43P17677 238 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 ADORA2BP29275 332 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 UBA7P41226 1012 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 INHBCP55103 352 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 MYL6P60660 151 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 HMGN5P82970 282 aaKnown RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 COG7P83436 770 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 OVGP1Q12889 678 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 ALCAMQ13740 583 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 IGFBP7Q16270 282 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 TBR1Q16650 682 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 ZNF699Q32M78 642 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 HNRNPA1L2Q32P51 320 aaKnown RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 MPPE1Q53F39 396 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 RILPL1Q5EBL4 403 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 RBM44Q6ZP01 1051 aaKnown RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 SND1Q7KZF4 910 aaKnown RBP eCLIP8.55□□□□□ -1.04
CD44-232ENST00000531118 CCDC186Q7Z3E2 898 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 KIAA0907Q7Z7F0 614 aaPredicted RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 ACOT1Q86TX2 421 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 MMAAQ8IVH4 418 aaKnown RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 FAM184AQ8NB25 1140 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 PLPP7Q8NBV4 271 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 OR14C36Q8NHC7 312 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 ARRDC3Q96B67 414 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 PLD4Q96BZ4 506 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 GRAMD1AQ96CP6 724 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 CDK5RAP1Q96SZ6 601 aaKnown RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 LLPHQ9BRT6 129 aaKnown RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 FUCA2Q9BTY2 467 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 ABCG4Q9H172 646 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 SDCBP2Q9H190 292 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 OSBPL2Q9H1P3 480 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 CAAP1Q9H8G2 361 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 PNPLA8Q9NP80 782 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 OLFML3Q9NRN5 406 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 TMPRSS4Q9NRS4 437 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 GEMIN8Q9NWZ8 242 aaKnown RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 NLGN3Q9NZ94 848 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 CLIC5Q9NZA1 410 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 PLEKHB1Q9UF11 243 aaPredicted RBP8.55□□□□□ -1.04
CD44-232ENST00000531118 CYTH4Q9UIA0 394 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 CA5BQ9Y2D0 317 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 F8P00451 2351 aa8.55□□□□□ -1.04
CD44-232ENST00000531118 CCDC187A0A096LP49 1063 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 CLSTN1O94985 981 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 ATP5BP06576 529 aaKnown RBP8.54□□□□□ -1.04
CD44-232ENST00000531118 THEGLP0DJG4 465 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 GOT1P17174 413 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 TNNI1P19237 187 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 MAT2AP31153 395 aaKnown RBP8.54□□□□□ -1.04
CD44-232ENST00000531118 CD70P32970 193 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 SGSHP51688 502 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 TRPC3Q13507 836 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 CLCA4Q14CN2 919 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 TGIF1Q15583 401 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 GUSBP11Q6P575 273 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 Q6ZVU0 165 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 PTRH1Q86Y79 214 aaKnown RBP8.54□□□□□ -1.04
CD44-232ENST00000531118 ZNF276Q8N554 614 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 HTR3CQ8WXA8 447 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 SYAP1Q96A49 352 aaPredicted RBP8.54□□□□□ -1.04
CD44-232ENST00000531118 UCN2Q96RP3 112 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 ARHGAP20Q9P2F6 1191 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 STRIP2Q9ULQ0 834 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 DMTF1Q9Y222 760 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 POLQO75417 2590 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 ITIH6Q6UXX5 1313 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 SDK2Q58EX2 2172 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 MED13Q9UHV7 2174 aa8.54□□□□□ -1.04
CD44-232ENST00000531118 SLC12A8A0AV02 714 aa8.53□□□□□ -1.04
CD44-232ENST00000531118 K7ESM1 405 aa8.53□□□□□ -1.04
CD44-232ENST00000531118 ST8SIA5O15466 376 aa8.53□□□□□ -1.04
CD44-232ENST00000531118 NOBOXO60393 691 aa8.53□□□□□ -1.04
CD44-232ENST00000531118 LILRA1O75019 489 aa8.53□□□□□ -1.04
CD44-232ENST00000531118 RTN2O75298 545 aa8.53□□□□□ -1.04
CD44-232ENST00000531118 TCEA3O75764 348 aa8.53□□□□□ -1.04
CD44-232ENST00000531118 LIPCP11150 499 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms