RNA–Protein interactions for RNA: ENST00000531034.1

PTP4A1P6-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 6, humanhuman

BASIC

Gene PTP4A1P6, Length 478 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P6-201ENST00000531034 MCM3P25205 808 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 MSX2P35548 267 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 BMPR1AP36894 532 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 PRPHP41219 470 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 PIP4K2AP48426 406 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 POLGP54098 1239 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ANTXR2P58335 489 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SLC26A5P58743 744 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 OLR1P78380 273 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SATB1Q01826 763 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 KRTAP1-1Q07627 177 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 KLHL30Q0D2K2 578 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 C17orf67Q0P5P2 114 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 CAMK2DQ13557 499 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 THOC5Q13769 683 aaKnown RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 KCNJ12Q14500 433 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 KCNAB1Q14722 419 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SMN1Q16637 294 aaKnown RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 MEP1BQ16820 701 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 C15orf59Q2T9L4 293 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ALG11Q2TAA5 492 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 KBTBD12Q3ZCT8 623 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 PLA1AQ53H76 456 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 MPP7Q5T2T1 576 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 FAM160B1Q5W0V3 765 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 IRGCQ6NXR0 463 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 CDC73Q6P1J9 531 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 WDR93Q6P2C0 686 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 LINC00696Q6ZRV3 163 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 PARS2Q7L3T8 475 aaKnown RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 LIMS2Q7Z4I7 341 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ZER1Q7Z7L7 766 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ADGRG6Q86SQ4 1221 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 TMEM110Q86TL2 294 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ADCK1Q86TW2 530 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 PROSER1Q86XN7 944 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 LINC00346Q8IVM7 164 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 TUSC5Q8IXB3 177 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 Q8N1X5 172 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 AMER2Q8N7J2 671 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ZBTB44Q8NCP5 570 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 NLGN4YQ8NFZ3 816 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 MBD3L2Q8NHZ7 208 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 CTCFLQ8NI51 663 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 MR1Q95460 341 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 NKD2Q969F2 451 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 VPS39Q96JC1 886 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 C5orf34Q96MH7 638 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SLX1AQ9BQ83 275 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 LBHD1Q9BQE6 289 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 PAAF1Q9BRP4 392 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SLC46A2Q9BY10 475 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SEC61A2Q9H9S3 476 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 NRIP3Q9NQ35 241 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ALKBH4Q9NXW9 302 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 AKAP7Q9P0M2 348 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ACTR3BQ9P1U1 418 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 IL19Q9UHD0 177 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 DNAI1Q9UI46 699 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 LEF1Q9UJU2 399 aaPredicted RBP4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ZBTB1Q9Y2K1 713 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 NEU2Q9Y3R4 380 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 IGSF1Q8N6C5 1336 aa4.42□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ATRNL1Q5VV63 1379 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 TCRBV21S2A2A0A5A6 115 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 TRBC2A0A5B9 178 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 A4D1N5 150 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 MBD3L5A6NJ08 208 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 FAM90A7PA6NKC0 464 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ZNF785A8K8V0 405 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 FAM90A22PA8MWA6 464 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 FAM90A12PA8MX19 464 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 FAM90A23PA8MXZ1 464 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 M0QYG6 137 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ZNF263O14978 683 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ZSCAN9O15535 394 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 HNRNPCL1O60812 293 aaKnown RBP4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 RTN2O75298 545 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ITGA10O75578 1167 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SIX3O95343 332 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 CER1O95813 267 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 FTCDO95954 541 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 OPN1MWP04001 364 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 FYNP06241 537 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SNRPA1P09661 255 aaKnown RBP4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 C1SP09871 688 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SBK3P0C264 359 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 OPN1MW2P0DN77 364 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 OPN1MW3P0DN78 364 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SELLP14151 372 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 TYMPP19971 482 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 CASTP20810 708 aaKnown RBP4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 HSPA4P34932 840 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 CASP3P42574 277 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 MTHFRP42898 656 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 TNNT2P45379 298 aaPredicted RBP4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 SLC15A1P46059 708 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ALDH1A3P47895 512 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 NT5C2P49902 561 aa4.41□□□□□ -1.7
PTP4A1P6-201ENST00000531034 ZNF135P52742 658 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms