RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 GCATO75600 419 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 TSHRP16473 764 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 KELP23276 732 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 DEUP1Q05D60 604 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 CERKLQ49MI3 558 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-213ENST00000530784 EPHA10Q5JZY3 1008 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 CCDC181Q5TID7 509 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 DENND2CQ68D51 928 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 SLC18B1Q6NT16 456 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 NEK8Q86SG6 692 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 CCDC33Q8N5R6 958 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 RNF152Q8N8N0 203 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 LRRC46Q96FV0 321 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 PRMT6Q96LA8 375 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-213ENST00000530784 FAM227BQ96M60 508 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 FYTTD1Q96QD9 318 aaKnown RBP7.98□□□□□ -1.13
CSDE1-213ENST00000530784 HEYLQ9NQ87 328 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-213ENST00000530784 GJB4Q9NTQ9 266 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 C9orf78Q9NZ63 289 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-213ENST00000530784 STEAP1Q9UHE8 339 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 PCDHAC2Q9Y5I4 1007 aa7.98□□□□□ -1.13
CSDE1-213ENST00000530784 A8MVJ9 347 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 LMO1P25800 156 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 RBL1P28749 1068 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 COPAP53621 1224 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 SSBP2P81877 361 aaPredicted RBP7.97□□□□□ -1.13
CSDE1-213ENST00000530784 FHL3Q13643 280 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 TNFAIP1Q13829 316 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 ZNF626Q68DY1 528 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 LINC01465Q8N7H1 131 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 CLMNQ96JQ2 1002 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 NAA15Q9BXJ9 866 aaKnown RBP7.97□□□□□ -1.13
CSDE1-213ENST00000530784 SLC25A32Q9H2D1 315 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 PDGFCQ9NRA1 345 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 FAM205AQ6ZU69 1335 aa7.97□□□□□ -1.13
CSDE1-213ENST00000530784 BTBD19C9JJ37 291 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 AREL1O15033 823 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 USP1O94782 785 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 FGFR2P21802 821 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 ATICP31939 592 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 HTR7P34969 479 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 GYG1P46976 350 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 STT3AP46977 705 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 UBE4AQ14139 1066 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 AWAT1Q58HT5 328 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 PJA1Q8NG27 643 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 MAFAQ8NHW3 353 aaPredicted RBP7.96□□□□□ -1.14
CSDE1-213ENST00000530784 TRIM17Q9Y577 477 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 MROH5Q6ZUA9 1318 aa7.96□□□□□ -1.14
CSDE1-213ENST00000530784 ECM29Q5VYK3 1845 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 SMIM35A0A1B0GVV1 85 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 CLCA1A8K7I4 914 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 INO80B-WBP1J3KQ70 363 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 TNRC18O15417 2968 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-213ENST00000530784 GNALP38405 381 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 CLCA4Q14CN2 919 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 ST3GAL2Q16842 350 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 CRTC1Q6UUV9 634 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 GALNT16Q8N428 558 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 FSTL5Q8N475 847 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-213ENST00000530784 TDRD7Q8NHU6 1098 aaKnown RBP7.95□□□□□ -1.14
CSDE1-213ENST00000530784 ERO1AQ96HE7 468 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 ZNF778Q96MU6 729 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 ZCWPW1Q9H0M4 648 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 TDRD3Q9H7E2 651 aaKnown RBP7.95□□□□□ -1.14
CSDE1-213ENST00000530784 RNF7Q9UBF6 113 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 ZNF70Q9UC06 446 aaPredicted RBP7.95□□□□□ -1.14
CSDE1-213ENST00000530784 ARAP2Q8WZ64 1704 aa7.95□□□□□ -1.14
CSDE1-213ENST00000530784 FRAT2O75474 233 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-213ENST00000530784 MYL3P08590 195 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 NBPF7P0C2Y1 421 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-213ENST00000530784 ARHGAP25P42331 645 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 ZNF81P51508 661 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 CAVIN4Q5BKX8 364 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 TMEM65Q6PI78 240 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 FAM9BQ8IZU0 186 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 MBD3L2Q8NHZ7 208 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-213ENST00000530784 OPTNQ96CV9 577 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 EDC3Q96F86 508 aaKnown RBP7.94□□□□□ -1.14
CSDE1-213ENST00000530784 KAZALD1Q96I82 304 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 VPS50Q96JG6 964 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 FAM84BQ96KN1 310 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-213ENST00000530784 EFHD1Q9BUP0 239 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 PUS3Q9BZE2 481 aaKnown RBP7.94□□□□□ -1.14
CSDE1-213ENST00000530784 BICC1Q9H694 974 aaKnown RBP7.94□□□□□ -1.14
CSDE1-213ENST00000530784 NRIP3Q9NQ35 241 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 MYO1AQ9UBC5 1043 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 UTYO14607 1347 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 LAMB1P07942 1786 aa7.94□□□□□ -1.14
CSDE1-213ENST00000530784 A0A1W2PPC4 97 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 TCP10L2B9ZVM9 353 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 TMEM232C9JQI7 657 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 TMEM225BP0DP42 221 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 ATF7P17544 494 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-213ENST00000530784 SFPQP23246 707 aaKnown RBP eCLIP7.93□□□□□ -1.14
CSDE1-213ENST00000530784 ADRA1DP25100 572 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 SP3Q02447 781 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 CFHR3Q02985 330 aa7.93□□□□□ -1.14
CSDE1-213ENST00000530784 CHAF1AQ13111 956 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-213ENST00000530784 VGLL4Q14135 290 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms