RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 CCR1P32246 355 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 GJC1P36383 396 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 ATP5C1P36542 298 aaKnown RBP16.09■□□□□ 0.17
CTSB-219ENST00000530640 DNA2P51530 1060 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 ARSEP51690 589 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 RING1Q06587 406 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 DPYSL2Q16555 572 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 PLK5Q496M5 336 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 BOLA3Q53S33 107 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 KCNT1Q5JUK3 1230 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 KBTBD6Q86V97 674 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 EXD1Q8NHP7 514 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 COG1Q8WTW3 980 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 EZH1Q92800 747 aaPredicted RBP16.09■□□□□ 0.17
CTSB-219ENST00000530640 PSMB7Q99436 277 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 ZWILCHQ9H900 591 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.09■□□□□ 0.17
CTSB-219ENST00000530640 KLHL11Q9NVR0 708 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 DDX56Q9NY93 547 aaKnown RBP16.09■□□□□ 0.17
CTSB-219ENST00000530640 COX16Q9P0S2 106 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 FZD10Q9ULW2 581 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 SAR1BQ9Y6B6 198 aa16.09■□□□□ 0.17
CTSB-219ENST00000530640 C3orf70A6NLC5 250 aaPredicted RBP16.08■□□□□ 0.16
CTSB-219ENST00000530640 KCNU1A8MYU2 1149 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 KRT1P04264 644 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 CXCR5P32302 372 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 ADRA1BP35368 520 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 MPLP40238 635 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 TBX4P57082 545 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 TAZQ16635 292 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 GAB4Q2WGN9 574 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 ATP13A4Q4VNC1 1196 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 LY6G5CQ5SRR4 150 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 ERMARDQ5T6L9 678 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 STPG1Q5TH74 334 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 SCYL2Q6P3W7 929 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 RHBDF2Q6PJF5 856 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 SND1Q7KZF4 910 aaKnown RBP eCLIP16.08■□□□□ 0.165e-15■■■■□ 19.9
CTSB-219ENST00000530640 VSIG1Q86XK7 387 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 MIB1Q86YT6 1006 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 BBS7Q8IWZ6 715 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 LSM7Q9UK45 103 aaKnown RBP16.08■□□□□ 0.16
CTSB-219ENST00000530640 AP4E1Q9UPM8 1137 aa16.08■□□□□ 0.16
CTSB-219ENST00000530640 SLC12A8A0AV02 714 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 SRGAP2O75044 1071 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 SLC2A3P11169 496 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 PYGMP11217 842 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 PMLP29590 882 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 PTPN7P35236 360 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 EIF2DP41214 584 aaKnown RBP16.07■□□□□ 0.16
CTSB-219ENST00000530640 SEC13P55735 322 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 GAD2Q05329 585 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 SEMA3BQ13214 749 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 CA9Q16790 459 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 USP39Q53GS9 565 aaKnown RBP16.07■□□□□ 0.16
CTSB-219ENST00000530640 ZC3H12AQ5D1E8 599 aaKnown RBP16.07■□□□□ 0.16
CTSB-219ENST00000530640 RASGEF1CQ8N431 466 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 RAPGEF5Q92565 580 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 PLD4Q96BZ4 506 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 RBM41Q96IZ5 413 aaKnown RBP16.07■□□□□ 0.16
CTSB-219ENST00000530640 PBKQ96KB5 322 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 KLF16Q9BXK1 252 aaPredicted RBP16.07■□□□□ 0.16
CTSB-219ENST00000530640 TKTL2Q9H0I9 626 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 WDCPQ9H6R7 721 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 TMPRSS4Q9NRS4 437 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.07■□□□□ 0.16
CTSB-219ENST00000530640 MRFAP1Q9Y605 127 aa16.07■□□□□ 0.16
CTSB-219ENST00000530640 ATG2BQ96BY7 2078 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.06■□□□□ 0.16
CTSB-219ENST00000530640 ZNF487B1APH4 448 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 ZNF185O15231 689 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 HOXC13P31276 330 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 PXNP49023 591 aaPredicted RBP16.06■□□□□ 0.16
CTSB-219ENST00000530640 KDSRQ06136 332 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 ZNF211Q13398 564 aaPredicted RBP16.06■□□□□ 0.16
CTSB-219ENST00000530640 DMC1Q14565 340 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 SF3A2Q15428 464 aaKnown RBP16.06■□□□□ 0.16
CTSB-219ENST00000530640 PPP2R5EQ16537 467 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 ARL13BQ3SXY8 428 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 HSF5Q4G112 596 aaPredicted RBP16.06■□□□□ 0.16
CTSB-219ENST00000530640 EFHC2Q5JST6 749 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 DNTTIP2Q5QJE6 756 aaKnown RBP16.06■□□□□ 0.16
CTSB-219ENST00000530640 ARTNQ5T4W7 220 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 RNF43Q68DV7 783 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 ANKS1BQ7Z6G8 1248 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 C12orf40Q86WS4 652 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 CREG2Q8IUH2 290 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 TSC1Q92574 1164 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 HSPH1Q92598 858 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 WBP2Q969T9 261 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 HHIPQ96QV1 700 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 HAPLN3Q96S86 360 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 PNKPQ96T60 521 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 DUSP15Q9H1R2 295 aaPredicted RBP16.06■□□□□ 0.16
CTSB-219ENST00000530640 PCDH18Q9HCL0 1135 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 ARHGEF4Q9NR80 690 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 SPHK2Q9NRA0 654 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 GPATCH2LQ9NWQ4 482 aa16.06■□□□□ 0.16
CTSB-219ENST00000530640 TTC7AQ9ULT0 858 aaPredicted RBP16.06■□□□□ 0.16
CTSB-219ENST00000530640 LRRD1A4D1F6 860 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms