RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 MAP6D1Q9H9H5 199 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 SEPSECSQ9HD40 501 aaKnown RBP3.32□□□□□ -1.88
NUP98-218ENST00000530516 DECR2Q9NUI1 292 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 MAGED2Q9UNF1 606 aaPredicted RBP3.32□□□□□ -1.88
NUP98-218ENST00000530516 RCE1Q9Y256 329 aa3.32□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3DA0A087WVF3 549 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3IA0A087WXS9 549 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3EA0A087X179 549 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3KA0A087X1G2 549 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 CCDC194A0A1B0GVG4 234 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3BA6NDS4 549 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3FA6NER0 549 aaPredicted RBP3.31□□□□□ -1.88
NUP98-218ENST00000530516 KCNJ18B7U540 433 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3LB9A6J9 549 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 MCIDASD6RGH6 385 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 GTPBP1O00178 669 aaKnown RBP3.31□□□□□ -1.88
NUP98-218ENST00000530516 SPTLC2O15270 562 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 PLIN1O60240 522 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 ACTL6BO94805 426 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 LARGE1O95461 756 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 SYF2O95926 243 aaKnown RBP3.31□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3HP0C7X1 549 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 SERPINF1P36955 418 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 POLD2P49005 469 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 CDK7P50613 346 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 RNASELQ05823 741 aaKnown RBP3.31□□□□□ -1.88
NUP98-218ENST00000530516 TUBB8Q3ZCM7 444 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 GALNTL6Q49A17 601 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TTC22Q5TAA0 569 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3GQ6DHY5 549 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3CQ6IPX1 549 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 HMBOX1Q6NT76 420 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TMEM88Q6PEY1 159 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 SLC44A2Q8IWA5 706 aaPredicted RBP3.31□□□□□ -1.88
NUP98-218ENST00000530516 TBC1D3Q8IZP1 549 aaPredicted RBP3.31□□□□□ -1.88
NUP98-218ENST00000530516 SPICE1Q8N0Z3 855 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 TMEM199Q8N511 208 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 ATG16L2Q8NAA4 619 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 FAM110DQ8TAY7 271 aaPredicted RBP3.31□□□□□ -1.88
NUP98-218ENST00000530516 HMGB4Q8WW32 186 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 NPAS1Q99742 590 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 ZPBPQ9BS86 351 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 PABPC3Q9H361 631 aaKnown RBP3.31□□□□□ -1.88
NUP98-218ENST00000530516 SLC8A2Q9UPR5 921 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 DTX4Q9Y2E6 619 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 PKP3Q9Y446 797 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 PCDHA10Q9Y5I2 948 aa3.31□□□□□ -1.88
NUP98-218ENST00000530516 ERVV-2B6SEH9 535 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 MDM4O15151 490 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 SKAP2O75563 359 aaPredicted RBP3.3□□□□□ -1.88
NUP98-218ENST00000530516 NFATC1O95644 943 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 IFNA2P01563 188 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 ITGA2BP08514 1039 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 PRPH2P23942 346 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 ARRB2P32121 409 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 CIITAP33076 1130 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 RCAN1P53805 252 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 P2RX3P56373 397 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 RHAGQ02094 409 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 GAD2Q05329 585 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 PPATQ06203 517 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 PTGR1Q14914 329 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 ASIC2Q16515 512 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 KRTAP27-1Q3LI81 207 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 ZNF569Q5MCW4 686 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 ENTPD8Q5MY95 495 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 TTC39AQ5SRH9 613 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 C10orf76Q5T2E6 689 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 SULT6B1Q6IMI4 303 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 PGBD2Q6P3X8 592 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 NFRKBQ6P4R8 1299 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 KDELC2Q7Z4H8 507 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 DCP1BQ8IZD4 617 aaKnown RBP3.3□□□□□ -1.88
NUP98-218ENST00000530516 CACNA2D3Q8IZS8 1091 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 SLC2A12Q8TD20 617 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 TMEM174Q8WUU8 243 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 FAM84BQ96KN1 310 aaPredicted RBP3.3□□□□□ -1.88
NUP98-218ENST00000530516 RMDN3Q96TC7 470 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 MAGEH1Q9H213 219 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 MRPL44Q9H9J2 332 aaKnown RBP3.3□□□□□ -1.88
NUP98-218ENST00000530516 ZNF304Q9HCX3 659 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 FZD3Q9NPG1 666 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 PLCB1Q9NQ66 1216 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 SLC22A11Q9NSA0 550 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 LIN7CQ9NUP9 197 aaKnown RBP3.3□□□□□ -1.88
NUP98-218ENST00000530516 TAGLN3Q9UI15 199 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 LRCH1Q9Y2L9 728 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 DAAM1Q9Y4D1 1078 aa3.3□□□□□ -1.88
NUP98-218ENST00000530516 DPPA5A6NC42 116 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 GRM8O00222 908 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 MSI1O43347 362 aaKnown RBP3.29□□□□□ -1.88
NUP98-218ENST00000530516 VEGFAP15692 232 aaPredicted RBP3.29□□□□□ -1.88
NUP98-218ENST00000530516 AP2B1P63010 937 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 ZNF628Q5EBL2 1059 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 TANGO2Q6ICL3 276 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 GSG1LQ6UXU4 331 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 CYB5R4Q7L1T6 521 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 TMEM217Q8N7C4 229 aa3.29□□□□□ -1.88
NUP98-218ENST00000530516 ZBTB8BQ8NAP8 495 aaPredicted RBP3.29□□□□□ -1.88
NUP98-218ENST00000530516 B4GALNT2Q8NHY0 566 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms