RNA–Protein interactions for RNA: ENST00000528873.2

GEN1-204, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 871 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-204ENST00000528873 LTBQ06643 244 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 SF3A3Q12874 501 aaKnown RBP eCLIP4.52□□□□□ -1.695e-6■■■■□ 19.6
GEN1-204ENST00000528873 STARD3Q14849 445 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 ASIC2Q16515 512 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 HSP90AB2PQ58FF8 381 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 ARL13AQ5H913 290 aaPredicted RBP4.52□□□□□ -1.69
GEN1-204ENST00000528873 TRILQ7L0X0 811 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 IGFN1Q86VF2 1251 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 KLBQ86Z14 1044 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 FAM186BQ8IYM0 893 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 RBMXL3Q8N7X1 1067 aaKnown RBP4.52□□□□□ -1.69
GEN1-204ENST00000528873 NUDCD2Q8WVJ2 157 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 HMGB4Q8WW32 186 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 MEIS3Q99687 375 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 ARNT2Q9HBZ2 717 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 ZNF304Q9HCX3 659 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 SELENONQ9NZV5 590 aa4.52□□□□□ -1.69
GEN1-204ENST00000528873 AQP12BA6NM10 295 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 BECN2A8MW95 431 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 ASNA1O43681 348 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 HOXC6P09630 235 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 KLRC2P26717 231 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 RASSF2P50749 326 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 ROR2Q01974 943 aaKnown RBP4.51□□□□□ -1.69
GEN1-204ENST00000528873 SLC4A8Q2Y0W8 1093 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 GGT6Q6P531 493 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 AAGABQ6PD74 315 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 RTL10Q7L3V2 364 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 ANKS1BQ7Z6G8 1248 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 TMEM200AQ86VY9 491 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 SPATA2LQ8IUW3 424 aaPredicted RBP4.51□□□□□ -1.69
GEN1-204ENST00000528873 DCP1BQ8IZD4 617 aaKnown RBP4.51□□□□□ -1.69
GEN1-204ENST00000528873 SLC25A41Q8N5S1 370 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 MED30Q96HR3 178 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 TMEM41AQ96HV5 264 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 URB1-AS1Q96HZ7 61 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 PLAC1Q9HBJ0 212 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 KRCC1Q9NPI7 259 aaPredicted RBP4.51□□□□□ -1.69
GEN1-204ENST00000528873 PNRC2Q9NPJ4 139 aaKnown RBP4.51□□□□□ -1.69
GEN1-204ENST00000528873 MYO6Q9UM54 1294 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 MAGED2Q9UNF1 606 aaPredicted RBP4.51□□□□□ -1.69
GEN1-204ENST00000528873 CNTN6Q9UQ52 1028 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 PCDHA10Q9Y5I2 948 aa4.51□□□□□ -1.69
GEN1-204ENST00000528873 EME2A4GXA9 379 aaPredicted RBP4.5□□□□□ -1.69
GEN1-204ENST00000528873 OR6C75A6NL08 312 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 SLC38A8A6NNN8 435 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 PRC1O43663 620 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 ACAA1P09110 424 aaPredicted RBP4.5□□□□□ -1.69
GEN1-204ENST00000528873 ARSBP15848 533 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 ENTPD1P49961 510 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 GPR18Q14330 331 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 BTBD16Q32M84 506 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 ATPAF1Q5TC12 328 aaPredicted RBP4.5□□□□□ -1.69
GEN1-204ENST00000528873 ZNF324BQ6AW86 544 aaPredicted RBP4.5□□□□□ -1.69
GEN1-204ENST00000528873 CCDC25Q86WR0 208 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 CAMK1DQ8IU85 385 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 FAM217AQ8IXS0 508 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 FAM185AQ8N0U4 392 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 GABPB2Q8TAK5 448 aaPredicted RBP4.5□□□□□ -1.69
GEN1-204ENST00000528873 FAM110DQ8TAY7 271 aaPredicted RBP4.5□□□□□ -1.69
GEN1-204ENST00000528873 STYXQ8WUJ0 223 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 RSC1A1Q92681 617 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 ARFGAP3Q9NP61 516 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 LIN7CQ9NUP9 197 aaKnown RBP4.5□□□□□ -1.69
GEN1-204ENST00000528873 ARL15Q9NXU5 204 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 NCKIPSDQ9NZQ3 722 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 WNT16Q9UBV4 365 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 ZNF112Q9UJU3 913 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 CDC23Q9UJX2 597 aa4.5□□□□□ -1.69
GEN1-204ENST00000528873 TCF20Q9UGU0 1960 aaKnown RBP4.49□□□□□ -1.69
GEN1-204ENST00000528873 A0A1B0GVT2 93 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 GOLGA6L3A6NEY3 463 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 AGAP5A6NIR3 686 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 MBD3L5A6NJ08 208 aaPredicted RBP4.49□□□□□ -1.69
GEN1-204ENST00000528873 FFAR2O15552 330 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 HMGB1P09429 215 aaKnown RBP4.49□□□□□ -1.69
GEN1-204ENST00000528873 HOXD3P31249 432 aaPredicted RBP4.49□□□□□ -1.69
GEN1-204ENST00000528873 PPM1AP35813 382 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 RCAN1P53805 252 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 EGR4Q05215 589 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 SPARCL1Q14515 664 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 NFATC4Q14934 902 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 INO80DQ53TQ3 878 aaPredicted RBP4.49□□□□□ -1.69
GEN1-204ENST00000528873 DCAF12L2Q5VW00 463 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 CAPRIN2Q6IMN6 1127 aaKnown RBP4.49□□□□□ -1.69
GEN1-204ENST00000528873 C18orf65Q6ZTR6 163 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 TMEM217Q8N7C4 229 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 PRR26Q8N8Z3 221 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 ENGASEQ8NFI3 743 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 ELP5Q8TE02 316 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 WDR77Q9BQA1 342 aaPredicted RBP4.49□□□□□ -1.69
GEN1-204ENST00000528873 DCLK3Q9C098 648 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 BRD8Q9H0E9 1235 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 NLRC4Q9NPP4 1024 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 RNF146Q9NTX7 359 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 PTGDR2Q9Y5Y4 395 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 SLC4A4Q9Y6R1 1079 aa4.49□□□□□ -1.69
GEN1-204ENST00000528873 NOTCH4Q99466 2003 aa4.48□□□□□ -1.69
GEN1-204ENST00000528873 TCRBV7S3A2A0A539 114 aa4.48□□□□□ -1.69
GEN1-204ENST00000528873 FAM90A18PA6NE21 464 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms