RNA–Protein interactions for RNA: ENST00000528781.1

AP001189.6-201, humanhuman

TSL 1 (best) BASIC

Gene AP001189.6, Length 831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001189.6-201ENST00000528781 RAB11FIP4Q86YS3 637 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 KIAA0319LQ8IZA0 1049 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 MYOCDQ8IZQ8 938 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 OR2I1PQ8NGU4 316 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 CTCFLQ8NI51 663 aaPredicted RBP3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 SPPL3Q8TCT6 385 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 SEPT8Q92599 483 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 PABPC5Q96DU9 382 aaKnown RBP3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 PTCD3Q96EY7 689 aaKnown RBP3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 CDHR1Q96JP9 859 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 NEK1Q96PY6 1258 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 SLC2A13Q96QE2 648 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 NELL2Q99435 816 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 MXRA8Q9BRK3 442 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 IFIH1Q9BYX4 1025 aaKnown RBP3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 RHOBTB2Q9BYZ6 727 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 BHMT2Q9H2M3 363 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 SMARCAD1Q9H4L7 1026 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 UBE2ZQ9H832 354 aaPredicted RBP3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 AGO4Q9HCK5 861 aaKnown RBP3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 RIC8AQ9NPQ8 531 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 DMRT3Q9NQL9 472 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 BARHL2Q9NY43 387 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 ERAP1Q9NZ08 941 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 KLHL42Q9P2K6 505 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 PADI3Q9ULW8 664 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 MYH4Q9Y623 1939 aa3.22□□□□□ -1.89
AP001189.6-201ENST00000528781 PRRC2BQ5JSZ5 2229 aaKnown RBP3.21□□□□□ -1.89
AP001189.6-201ENST00000528781 IGSF9BQ9UPX0 1349 aa3.21□□□□□ -1.89
AP001189.6-201ENST00000528781 KDM3AQ9Y4C1 1321 aa3.21□□□□□ -1.89
AP001189.6-201ENST00000528781 A0A1B0GTW7 788 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 SMIM35A0A1B0GVV1 85 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 ESYT2A0FGR8 921 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 SMCO2A6NFE2 343 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 CCDC69A6NI79 296 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 H3BQ06 376 aaPredicted RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 MGEA5O60502 916 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 NDUFS2O75306 463 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 GPR32O75388 356 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 MMP1P03956 469 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 GHRP10912 638 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 KCNA5P22460 613 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 MARK3P27448 753 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 CD52P31358 61 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 CCKARP32238 428 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 CIITAP33076 1130 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 SLC6A9P48067 706 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 SLC5A3P53794 718 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 RCAN1P53805 252 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 EPHB1P54762 984 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 NRG3P56975 720 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 ACTR2P61160 394 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 CCT2P78371 535 aaKnown RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 MRPS6P82932 125 aaKnown RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 CDK17Q00537 523 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 SP4Q02446 784 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 MGAT2Q10469 447 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 HYAL1Q12794 435 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 PPFIA1Q13136 1202 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 GPM6BQ13491 265 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 PFKFB3Q16875 520 aaPredicted RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 C19orf54Q5BKX5 351 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 TCEAL5Q5H9L2 206 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 PGM2L1Q6PCE3 622 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 MTHFD1LQ6UB35 978 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 B3GNT9Q6UX72 402 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 TSHZ1Q6ZSZ6 1077 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 FAM43BQ6ZT52 329 aaPredicted RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 Q6ZVL8 140 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 NIPA1Q7RTP0 329 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 MICU3Q86XE3 530 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 ZDHHC17Q8IUH5 632 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 CCDC60Q8IWA6 550 aaPredicted RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 NME8Q8N427 588 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 CPA6Q8N4T0 437 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 LINC01465Q8N7H1 131 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 TET1Q8NFU7 2136 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 SEMA6DQ8NFY4 1073 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 SNX33Q8WV41 574 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 TRAPPC12Q8WVT3 735 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 CUL5Q93034 780 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 P2RX5Q93086 422 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 RNF31Q96EP0 1072 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 PGBD1Q96JS3 809 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 MSLNLQ96KJ4 702 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 TCEANC2Q96MN5 208 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 PPP1R10Q96QC0 940 aaKnown RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 YME1L1Q96TA2 773 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 ZSWIM1Q9BR11 485 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 ACE2Q9BYF1 805 aaPredicted RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 ZMYND12Q9H0C1 365 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 LMAN2LQ9H0V9 348 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 CDH19Q9H159 772 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 RBM28Q9NW13 759 aaKnown RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 MKS1Q9NXB0 559 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 SLC9A2Q9UBY0 812 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 SEC63Q9UGP8 760 aaKnown RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 TUBE1Q9UJT0 475 aa3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 ZNF215Q9UL58 517 aaPredicted RBP3.21□□□□□ -1.9
AP001189.6-201ENST00000528781 TBC1D30Q9Y2I9 924 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms