RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 CLDN5O00501 218 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 GLRA3O75311 464 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 PCSK6P29122 969 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 EFNA5P52803 228 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 CDH15P55291 814 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 MAP7Q14244 749 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 SLC10A6Q3KNW5 377 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 ANKRD20A4Q4UJ75 823 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 BOLA3Q53S33 107 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 CDKL3Q8IVW4 592 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-206ENST00000528302 FNIP1Q8TF40 1166 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 TMIGD2Q96BF3 282 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 PPWD1Q96BP3 646 aaKnown RBP10.09□□□□□ -0.79
SF3B2-206ENST00000528302 CSPG4P5Q96PW8 444 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 TBCBQ99426 244 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 FAM192AQ9GZU8 254 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 LHX5Q9H2C1 402 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 GOLGA2P5Q9HBQ8 144 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 DPP3Q9NY33 737 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 EFR3BQ9Y2G0 817 aa10.09□□□□□ -0.79
SF3B2-206ENST00000528302 NEMP2A6NFY4 417 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 TRDMT1O14717 391 aaKnown RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 GABBR2O75899 941 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 CRTAMO95727 393 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 PIGRP01833 764 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 PFKMP08237 780 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ZNF286BP0CG31 522 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 P4HA1P13674 534 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 LMO2P25791 158 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 CDKL1Q00532 357 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 IFRD2Q12894 506 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 DYNC1I2Q13409 638 aaKnown RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 CMPK2Q5EBM0 449 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 FKBP1CQ5VVH2 108 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 DCAF15Q66K64 600 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 SLC9A4Q6AI14 798 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 PQLC1Q8N2U9 271 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 METTL25Q8N6Q8 603 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 P2RY11Q96G91 374 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ZNF512Q96ME7 567 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 PRDM12Q9H4Q4 367 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 TMEM134Q9H6X4 195 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 CHRAC1Q9NRG0 131 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 GNEQ9Y223 722 aaKnown RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 PIGNO95427 931 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 VDRP11473 427 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 HNRNPLP14866 589 aaKnown RBP eCLIP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 PTPN1P18031 435 aaKnown RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 AKAP5P24588 427 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 L1CAMP32004 1257 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ARL4AP40617 200 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 POU5F1BQ06416 359 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ITGA7Q13683 1181 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 VGLL4Q14135 290 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 TBC1D25Q3MII6 688 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 IER5Q5VY09 327 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 FSTL4Q6MZW2 842 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 KLHDC10Q6PID8 442 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 DSELQ8IZU8 1212 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 MYO1HQ8N1T3 1032 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 FAM81AQ8TBF8 368 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ZFAND2BQ8WV99 257 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ATP6V1E2Q96A05 226 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 CELF6Q96J87 481 aaKnown RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 OLFM3Q96PB7 478 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 PKP2Q99959 881 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ARPC5LQ9BPX5 153 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 SLC39A3Q9BRY0 314 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 TRIM8Q9BZR9 551 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 GTSE1Q9NYZ3 720 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 FER1L6Q2WGJ9 1857 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 SF3B1O75533 1304 aaKnown RBP eCLIP10.08□□□□□ -0.86e-7■■■■■ 47.6
SF3B2-206ENST00000528302 ZNF646O15015 1829 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ATP6AP2A0A1C7CYW4 349 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 SOWAHBA6NEL2 793 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 H3BNX3 289 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ACKR2O00590 384 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ATP6AP2O75787 350 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 MX2P20592 715 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 PIK3R1P27986 724 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 NDUFV1P49821 464 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 TAZQ16635 292 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 MFSD4BQ5TF39 518 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 EXT2Q93063 718 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 EME1Q96AY2 570 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 SLC45A3Q96JT2 553 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 DCUN1D5Q9BTE7 237 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 GATA5Q9BWX5 397 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 TRPV6Q9H1D0 765 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 AS3MTQ9HBK9 375 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 PTPRHQ9HD43 1115 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 DDX43Q9NXZ2 648 aaKnown RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 LMCD1Q9NZU5 365 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 ZNF180Q9UJW8 692 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 BARX2Q9UMQ3 279 aaPredicted RBP10.08□□□□□ -0.8
SF3B2-206ENST00000528302 TLL2Q9Y6L7 1015 aa10.08□□□□□ -0.8
SF3B2-206ENST00000528302 PRKCGP05129 697 aa10.07□□□□□ -0.8
SF3B2-206ENST00000528302 ARF4P18085 180 aaPredicted RBP10.07□□□□□ -0.8
SF3B2-206ENST00000528302 TGM2P21980 687 aa10.07□□□□□ -0.8
SF3B2-206ENST00000528302 MAP3K10Q02779 954 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms