RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 NOP9Q86U38 636 aaKnown RBP23.83■■□□□ 1.41
PKP3-206ENST00000528036 XYLT1Q86Y38 959 aa23.83■■□□□ 1.41
PKP3-206ENST00000528036 DHX40Q8IX18 779 aaKnown RBP23.83■■□□□ 1.41
PKP3-206ENST00000528036 APCDD1Q8J025 514 aa23.83■■□□□ 1.41
PKP3-206ENST00000528036 SKA1Q96BD8 255 aa23.83■■□□□ 1.41
PKP3-206ENST00000528036 SPAG5Q96R06 1193 aa23.83■■□□□ 1.41
PKP3-206ENST00000528036 OMDQ99983 421 aa23.83■■□□□ 1.41
PKP3-206ENST00000528036 TKTL2Q9H0I9 626 aa23.83■■□□□ 1.41
PKP3-206ENST00000528036 VANGL2Q9ULK5 521 aa23.83■■□□□ 1.41
PKP3-206ENST00000528036 TBC1D30Q9Y2I9 924 aa23.83■■□□□ 1.41
PKP3-206ENST00000528036 ACACBO00763 2458 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 SOX5P35711 763 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 STAT1P42224 750 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 SULT1E1P49888 294 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 KRT83P78385 493 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 CDR2Q01850 454 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 TAF3Q5VWG9 929 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 CXorf57Q6NSI4 855 aaKnown RBP23.82■■□□□ 1.4
PKP3-206ENST00000528036 C1orf216Q8TAB5 229 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 SNX19Q92543 992 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 HAPLN3Q96S86 360 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 FEM1AQ9BSK4 669 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 GANQ9H2C0 597 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 C6orf106Q9H6K1 298 aaPredicted RBP23.82■■□□□ 1.4
PKP3-206ENST00000528036 PIGVQ9NUD9 493 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 FANCLQ9NW38 375 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 SLCO3A1Q9UIG8 710 aa23.82■■□□□ 1.4
PKP3-206ENST00000528036 MUC22E2RYF6 1773 aaPredicted RBP23.81■■□□□ 1.4
PKP3-206ENST00000528036 CACNA1EQ15878 2313 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 LRRC10BA6NIK2 292 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 TTC34A8MYJ7 566 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 GIPC1O14908 333 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 GJB3O75712 270 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 SLC8A1P32418 973 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 GRIA4P48058 902 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 POLR2FP61218 127 aaKnown RBP23.81■■□□□ 1.4
PKP3-206ENST00000528036 NOMO3P69849 1222 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 CCDC183Q5T5S1 534 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 FAM46CQ5VWP2 391 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 SETD3Q86TU7 594 aaPredicted RBP23.81■■□□□ 1.4
PKP3-206ENST00000528036 IGSF8Q969P0 613 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 NAT10Q9H0A0 1025 aaKnown RBP23.81■■□□□ 1.4
PKP3-206ENST00000528036 SIK2Q9H0K1 926 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 RETREG1Q9H6L5 497 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 FSCN3Q9NQT6 498 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 LIMA1Q9UHB6 759 aaKnown RBP23.81■■□□□ 1.4
PKP3-206ENST00000528036 PCDHGB2Q9Y5G2 931 aa23.81■■□□□ 1.4
PKP3-206ENST00000528036 ALOX15BO15296 676 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 ATP9BO43861 1147 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 DFNA5O60443 496 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 CD59P13987 128 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 GOT1P17174 413 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 CDK11BP21127 795 aaKnown RBP23.8■■□□□ 1.4
PKP3-206ENST00000528036 LAMA1P25391 3075 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 CTSOP43234 321 aaPredicted RBP23.8■■□□□ 1.4
PKP3-206ENST00000528036 SUZ12Q15022 739 aaKnown RBP23.8■■□□□ 1.4
PKP3-206ENST00000528036 KIAA0895LQ68EN5 471 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 MMAAQ8IVH4 418 aaKnown RBP23.8■■□□□ 1.4
PKP3-206ENST00000528036 OR2T34Q8NGX1 318 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 PTPRN2Q92932 1015 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 BIRC7Q96CA5 298 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 RPL10LQ96L21 214 aaKnown RBP23.8■■□□□ 1.4
PKP3-206ENST00000528036 FAM129BQ96TA1 746 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 C2orf49Q9BVC5 232 aaPredicted RBP23.8■■□□□ 1.4
PKP3-206ENST00000528036 KDM4CQ9H3R0 1056 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 FAM207AQ9NSI2 230 aaPredicted RBP23.8■■□□□ 1.4
PKP3-206ENST00000528036 TMEM59LQ9UK28 342 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 VPS28Q9UK41 221 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 FARP1Q9Y4F1 1045 aaPredicted RBP23.8■■□□□ 1.4
PKP3-206ENST00000528036 PCDHB9Q9Y5E1 797 aa23.8■■□□□ 1.4
PKP3-206ENST00000528036 ASCC3Q8N3C0 2202 aaKnown RBP23.8■■□□□ 1.4
PKP3-206ENST00000528036 DRGXA6NNA5 263 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 MID1O15344 667 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 GFPT2O94808 682 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 FSBPO95073 299 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 ADCY5O95622 1261 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 MMEP08473 750 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 CCDC172P0C7W6 258 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 MZF1P28698 734 aaPredicted RBP23.79■■□□□ 1.4
PKP3-206ENST00000528036 COPB1P53618 953 aaKnown RBP23.79■■□□□ 1.4
PKP3-206ENST00000528036 JAM2P57087 298 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 CCDC15Q0P6D6 951 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 ZNF423Q2M1K9 1284 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 C6orf118Q5T5N4 469 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 NAA35Q5VZE5 725 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 ZNF783Q6ZMS7 281 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 NEK11Q8NG66 645 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 CPA5Q8WXQ8 436 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 OR8D1Q8WZ84 308 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 ALG14Q96F25 216 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 CCDC114Q96M63 670 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 PCMTD1Q96MG8 357 aaPredicted RBP23.79■■□□□ 1.4
PKP3-206ENST00000528036 NOCTQ9UK39 431 aaKnown RBP23.79■■□□□ 1.4
PKP3-206ENST00000528036 PCDH15Q96QU1 1955 aa23.79■■□□□ 1.4
PKP3-206ENST00000528036 LGALS16A8MUM7 142 aa23.78■■□□□ 1.4
PKP3-206ENST00000528036 SLC7A4O43246 635 aa23.78■■□□□ 1.4
PKP3-206ENST00000528036 RNASEH2AO75792 299 aaKnown RBP23.78■■□□□ 1.4
PKP3-206ENST00000528036 CYP1A1P04798 512 aaPredicted RBP23.78■■□□□ 1.4
PKP3-206ENST00000528036 MMP8P22894 467 aa23.78■■□□□ 1.4
PKP3-206ENST00000528036 NUDT1P36639 197 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms