RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 FAM170AA1A519 330 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 TEX33O43247 280 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 SERPINF2P08697 491 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 PTMSP20962 102 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 MZF1P28698 734 aaPredicted RBP34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 IRAK1P51617 712 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 IQCB1Q15051 598 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 CACUL1Q86Y37 369 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 DNASE2BQ8WZ79 361 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 ALG14Q96F25 216 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 GPR174Q9BXC1 333 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 CAPN10Q9HC96 672 aa34.02■■■■□ 3.04
SSSCA1-205ENST00000527920 CNOT1A5YKK6 2376 aaKnown RBP34.01■■■■□ 3.04
SSSCA1-205ENST00000527920 EDDM13A0A1B0GTR0 161 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 A0A1W2PQC6 194 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 MED19A0JLT2 244 aaPredicted RBP34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 DRGXA6NNA5 263 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 SIN3BO75182 1162 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 DNTTP04053 509 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 CALB1P05937 261 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 GGCXP38435 758 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 TTC31Q49AM3 519 aaPredicted RBP34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 C9orf64Q5T6V5 341 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 LRRC31Q6UY01 552 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 AGPAT1Q99943 283 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 FEM1AQ9BSK4 669 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 ADAM22Q9P0K1 906 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 OR51B4Q9Y5P0 310 aa34.01■■■■□ 3.03
SSSCA1-205ENST00000527920 IGLV3-10A0A075B6K4 115 aa34■■■■□ 3.03
SSSCA1-205ENST00000527920 CDX4O14627 284 aaPredicted RBP34■■■■□ 3.03
SSSCA1-205ENST00000527920 RNASEH1O60930 286 aaKnown RBP34■■■■□ 3.03
SSSCA1-205ENST00000527920 NNMTP40261 264 aa34■■■■□ 3.03
SSSCA1-205ENST00000527920 PTPN9P43378 593 aa34■■■■□ 3.03
SSSCA1-205ENST00000527920 EMC1Q8N766 993 aa34■■■■□ 3.03
SSSCA1-205ENST00000527920 BAP1Q92560 729 aa34■■■■□ 3.03
SSSCA1-205ENST00000527920 MTG2Q9H4K7 406 aa34■■■■□ 3.03
SSSCA1-205ENST00000527920 SLCO3A1Q9UIG8 710 aa34■■■■□ 3.03
SSSCA1-205ENST00000527920 CEP192Q8TEP8 1941 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 A0A1B0GTH6 734 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 C2CD4BA6NLJ0 364 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 C4orf47A7E2U8 309 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 METTL12A8MUP2 240 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 TTC34A8MYJ7 566 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 CFIP05156 583 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 SDC4P31431 198 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 C1QBPQ07021 282 aaKnown RBP33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 DAB2IPQ5VWQ8 1189 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 USP30Q70CQ3 517 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 C3orf20Q8ND61 904 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 RXFP2Q8WXD0 754 aa33.99■■■■□ 3.03
SSSCA1-205ENST00000527920 MEI4A8MW99 385 aa33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 GNSP15586 552 aa33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 ENGP17813 658 aa33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 GFPT1Q06210 699 aaPredicted RBP33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 SFSWAPQ12872 951 aaKnown RBP33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 MON1BQ7L1V2 547 aa33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 STRADAQ7RTN6 431 aa33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 IRF2BP2Q7Z5L9 587 aa33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 SETD3Q86TU7 594 aaPredicted RBP33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 FAM131BQ86XD5 332 aa33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 RGL4Q8IZJ4 473 aa33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 OR52K2Q8NGK3 314 aa33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 RPL10LQ96L21 214 aaKnown RBP33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 PABPC3Q9H361 631 aaKnown RBP33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 PI4KAP42356 2102 aa33.98■■■■□ 3.03
SSSCA1-205ENST00000527920 CNTN5O94779 1100 aa33.97■■■■□ 3.03
SSSCA1-205ENST00000527920 KRT3P12035 628 aa33.97■■■■□ 3.03
SSSCA1-205ENST00000527920 ATP11AP98196 1134 aa33.97■■■■□ 3.03
SSSCA1-205ENST00000527920 CCDC14Q49A88 953 aa33.97■■■■□ 3.03
SSSCA1-205ENST00000527920 PPM1JQ5JR12 505 aa33.97■■■■□ 3.03
SSSCA1-205ENST00000527920 CENPIQ92674 756 aaPredicted RBP33.97■■■■□ 3.03
SSSCA1-205ENST00000527920 SYT11Q9BT88 431 aa33.97■■■■□ 3.03
SSSCA1-205ENST00000527920 BTBD1Q9H0C5 482 aa33.97■■■■□ 3.03
SSSCA1-205ENST00000527920 SGK2Q9HBY8 427 aa33.97■■■■□ 3.03
SSSCA1-205ENST00000527920 VPS28Q9UK41 221 aa33.97■■■■□ 3.03
SSSCA1-205ENST00000527920 SYCE3A1L190 88 aa33.96■■■■□ 3.03
SSSCA1-205ENST00000527920 E9PAM4 449 aa33.96■■■■□ 3.03
SSSCA1-205ENST00000527920 STK19P49842 368 aaPredicted RBP33.96■■■■□ 3.03
SSSCA1-205ENST00000527920 ELAVL3Q14576 367 aaKnown RBP33.96■■■■□ 3.03
SSSCA1-205ENST00000527920 ALFQ53S48 1182 aa33.96■■■■□ 3.03
SSSCA1-205ENST00000527920 ARTNQ5T4W7 220 aa33.96■■■■□ 3.03
SSSCA1-205ENST00000527920 PPP1R2P3Q6NXS1 205 aa33.96■■■■□ 3.03
SSSCA1-205ENST00000527920 JOSD2Q8TAC2 188 aa33.96■■■■□ 3.03
SSSCA1-205ENST00000527920 PTPRN2Q92932 1015 aa33.96■■■■□ 3.03
SSSCA1-205ENST00000527920 SEPT11Q9NVA2 429 aaKnown RBP33.96■■■■□ 3.03
SSSCA1-205ENST00000527920 ATP9BO43861 1147 aa33.95■■■■□ 3.03
SSSCA1-205ENST00000527920 ACSL1P33121 698 aa33.95■■■■□ 3.03
SSSCA1-205ENST00000527920 NRG1Q02297 640 aaPredicted RBP33.95■■■■□ 3.03
SSSCA1-205ENST00000527920 DCAF12L1Q5VU92 463 aa33.95■■■■□ 3.03
SSSCA1-205ENST00000527920 FAM124AQ86V42 546 aa33.95■■■■□ 3.03
SSSCA1-205ENST00000527920 FRS2Q8WU20 508 aa33.95■■■■□ 3.03
SSSCA1-205ENST00000527920 FAM129BQ96TA1 746 aa33.95■■■■□ 3.03
SSSCA1-205ENST00000527920 TMPRSS4Q9NRS4 437 aa33.95■■■■□ 3.03
SSSCA1-205ENST00000527920 SLC25A13Q9UJS0 675 aa33.95■■■■□ 3.03
SSSCA1-205ENST00000527920 SNX10Q9Y5X0 201 aa33.95■■■■□ 3.03
SSSCA1-205ENST00000527920 TCRBV5S1A1TA0A578 114 aa33.94■■■■□ 3.02
SSSCA1-205ENST00000527920 SIGLEC16A6NMB1 481 aa33.94■■■■□ 3.02
SSSCA1-205ENST00000527920 CST6Q15828 149 aa33.94■■■■□ 3.02
SSSCA1-205ENST00000527920 ARL13BQ3SXY8 428 aa33.94■■■■□ 3.02
SSSCA1-205ENST00000527920 PHLDB2Q86SQ0 1253 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms