RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 LRRC72A6NJI9 287 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 MED7O43513 233 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 RNASEH1O60930 286 aaKnown RBP10.91□□□□□ -0.66
CPSF1-203ENST00000527916 IGLV3-27P01718 113 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 ATP5BP06576 529 aaKnown RBP10.91□□□□□ -0.66
CPSF1-203ENST00000527916 LCP1P13796 627 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 CD38P28907 300 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 EPHA8P29322 1005 aaPredicted RBP10.91□□□□□ -0.66
CPSF1-203ENST00000527916 GPD2P43304 727 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 ACADSBP45954 432 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 MPPE1Q53F39 396 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 ADGRF1Q5T601 910 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 TMEM215Q68D42 235 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 CLEC17AQ6ZS10 378 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 IRF2BP1Q8IU81 584 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 UNC45BQ8IWX7 931 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 DHX40Q8IX18 779 aaKnown RBP10.91□□□□□ -0.66
CPSF1-203ENST00000527916 CYB5D2Q8WUJ1 264 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 MED8Q96G25 268 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 NAF1Q96HR8 494 aaKnown RBP10.91□□□□□ -0.66
CPSF1-203ENST00000527916 INTS2Q9H0H0 1204 aaKnown RBP10.91□□□□□ -0.66
CPSF1-203ENST00000527916 CPNE5Q9HCH3 593 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 UBE2TQ9NPD8 197 aaPredicted RBP10.91□□□□□ -0.66
CPSF1-203ENST00000527916 PRSS16Q9NQE7 514 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 SFMBT1Q9UHJ3 866 aa10.91□□□□□ -0.66
CPSF1-203ENST00000527916 TPX2Q9ULW0 747 aaKnown RBP10.91□□□□□ -0.66
CPSF1-203ENST00000527916 M0QYV0 167 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 SART1O43290 800 aaKnown RBP10.9□□□□□ -0.66
CPSF1-203ENST00000527916 LTFP02788 710 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 DLDP09622 509 aaKnown RBP10.9□□□□□ -0.66
CPSF1-203ENST00000527916 BRD2P25440 801 aaKnown RBP10.9□□□□□ -0.66
CPSF1-203ENST00000527916 RXRGP48443 463 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 RGS7P49802 495 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 CSRP3P50461 194 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 INSM1Q01101 510 aaPredicted RBP10.9□□□□□ -0.66
CPSF1-203ENST00000527916 LY6DQ14210 128 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 SHBQ15464 509 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 CT47A1Q5JQC4 288 aaPredicted RBP10.9□□□□□ -0.66
CPSF1-203ENST00000527916 MPP7Q5T2T1 576 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 TRIM65Q6PJ69 517 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 KDM7AQ6ZMT4 941 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 GBP6Q6ZN66 633 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 CHST9Q7L1S5 443 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 ZNF366Q8N895 744 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 ZNF606Q8WXB4 792 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 EDEM1Q92611 657 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 TRIM62Q9BVG3 475 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 SLC4A5Q9BY07 1137 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 DPH1Q9BZG8 443 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 PABPC3Q9H361 631 aaKnown RBP10.9□□□□□ -0.66
CPSF1-203ENST00000527916 CLSTN2Q9H4D0 955 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 ERVMER34-1Q9H9K5 563 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 FBXL12Q9NXK8 326 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 CLEC4EQ9ULY5 219 aa10.9□□□□□ -0.66
CPSF1-203ENST00000527916 UBR5O95071 2799 aaPredicted RBP10.89□□□□□ -0.67
CPSF1-203ENST00000527916 PYCARD-AS1I3L0S3 204 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 TLR4O00206 839 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 IRAK2O43187 625 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 MT-CO3P00414 261 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 FYNP06241 537 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 ACP1P24666 158 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 ERCC5P28715 1186 aaPredicted RBP10.89□□□□□ -0.67
CPSF1-203ENST00000527916 HLA-FP30511 346 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 GALCP54803 685 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 ERVPABLB-1P60509 514 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 VAC14Q08AM6 782 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 NNTQ13423 1086 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 EXOC3L4Q17RC7 722 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 HS1BP3Q53T59 392 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 SFMBT2Q5VUG0 894 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 NUGGCQ68CJ6 796 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 NCEH1Q6PIU2 408 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 KIAA0907Q7Z7F0 614 aaPredicted RBP10.89□□□□□ -0.67
CPSF1-203ENST00000527916 TMEM110Q86TL2 294 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 LURAP1LQ8IV03 231 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 AHI1Q8N157 1196 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 OR2T34Q8NGX1 318 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 KCNE4Q8WWG9 221 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 TMA16Q96EY4 203 aaKnown RBP10.89□□□□□ -0.67
CPSF1-203ENST00000527916 HIC2Q96JB3 615 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 SERAC1Q96JX3 654 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 SEMA4CQ9C0C4 833 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 RSPH9Q9H1X1 276 aaPredicted RBP10.89□□□□□ -0.67
CPSF1-203ENST00000527916 THAP9Q9H5L6 903 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 PLXNA2O75051 1894 aa10.89□□□□□ -0.67
CPSF1-203ENST00000527916 TEX15Q9BXT5 2789 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 DOPEY2Q9Y3R5 2298 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 USP9XQ93008 2570 aaPredicted RBP10.88□□□□□ -0.67
CPSF1-203ENST00000527916 KLK10O43240 276 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 MAGEC1O60732 1142 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 DXOO77932 396 aaKnown RBP10.88□□□□□ -0.67
CPSF1-203ENST00000527916 LETM1O95202 739 aaPredicted RBP10.88□□□□□ -0.67
CPSF1-203ENST00000527916 WNT1P04628 370 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 KRT5P13647 590 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 POLR2EP19388 210 aaKnown RBP10.88□□□□□ -0.67
CPSF1-203ENST00000527916 SLC9A1P19634 815 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 PON1P27169 355 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 HOXD9P28356 352 aaPredicted RBP10.88□□□□□ -0.67
CPSF1-203ENST00000527916 GNA15P30679 374 aa10.88□□□□□ -0.67
CPSF1-203ENST00000527916 SLC11A2P49281 568 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms