RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 SLC36A4Q6YBV0 504 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 SETD3Q86TU7 594 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-209ENST00000527469 DNAAF5Q86Y56 855 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 TMPRSS6Q8IU80 811 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 DRC7Q8IY82 874 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 APCDD1Q8J025 514 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 DCLK2Q8N568 766 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 KDM1BQ8NB78 822 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 OR2T3Q8NH03 318 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 OLIG1Q8TAK6 271 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 CENPIQ92674 756 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-209ENST00000527469 NTAN1Q96AB6 310 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 ZC3H10Q96K80 434 aaKnown RBP13.76□□□□□ -0.21
CAPN1-209ENST00000527469 LMLNQ96KR4 655 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 FEM1AQ9BSK4 669 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 C2orf49Q9BVC5 232 aaPredicted RBP13.76□□□□□ -0.21
CAPN1-209ENST00000527469 SLC6A17Q9H1V8 727 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 INTS6Q9UL03 887 aaKnown RBP13.76□□□□□ -0.21
CAPN1-209ENST00000527469 SPAG17Q6Q759 2223 aa13.76□□□□□ -0.21
CAPN1-209ENST00000527469 EDDM13A0A1B0GTR0 161 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 TCRBV5S1A1TA0A578 114 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 DRGXA6NNA5 263 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 I6L893 689 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-209ENST00000527469 AP5Z1O43299 807 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 DNTTP04053 509 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 EIF4A3P38919 411 aaKnown RBP13.75□□□□□ -0.21
CAPN1-209ENST00000527469 CTSOP43234 321 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-209ENST00000527469 AIF1P55008 147 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 RPL6Q02878 288 aaKnown RBP13.75□□□□□ -0.21
CAPN1-209ENST00000527469 CREB5Q02930 508 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 SPEM2Q0P670 501 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 SFSWAPQ12872 951 aaKnown RBP13.75□□□□□ -0.21
CAPN1-209ENST00000527469 HNRNPA1L2Q32P51 320 aaKnown RBP13.75□□□□□ -0.21
CAPN1-209ENST00000527469 MAP7D1Q3KQU3 841 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 ACCSLQ4AC99 568 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 RAB6CQ53S08 254 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 ALFQ53S48 1182 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 ALKBH5Q6P6C2 394 aaKnown RBP13.75□□□□□ -0.21
CAPN1-209ENST00000527469 CNGA4Q8IV77 575 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 KIAA2013Q8IYS2 634 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 CCDC185Q8N715 623 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 GANCQ8TET4 914 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 TBC1D31Q96DN5 1066 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 RPL10LQ96L21 214 aaKnown RBP13.75□□□□□ -0.21
CAPN1-209ENST00000527469 EPAS1Q99814 870 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 SPON2Q9BUD6 331 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 RAB6CQ9H0N0 254 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 ISCUQ9H1K1 167 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 OSBPL2Q9H1P3 480 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 DUSP15Q9H1R2 295 aaPredicted RBP13.75□□□□□ -0.21
CAPN1-209ENST00000527469 ARRDC1-AS1Q9H2J1 176 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 TMEM245Q9H330 911 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 PPARGC1AQ9UBK2 798 aaKnown RBP13.75□□□□□ -0.21
CAPN1-209ENST00000527469 TBC1D30Q9Y2I9 924 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 USP34Q70CQ2 3546 aa13.75□□□□□ -0.21
CAPN1-209ENST00000527469 FRYLO94915 3013 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 IGLV3-10A0A075B6K4 115 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 A0A087X0T9 212 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 TMEM191CA6NGB0 347 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 CREB3O43889 395 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 AKR1B10O60218 316 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 PRPSAP2O60256 369 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 LRP3O75074 770 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 EPN2O95208 641 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 FAM228BP0C875 321 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 BCKDHBP21953 392 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 OXTRP30559 389 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 HNRNPH3P31942 346 aaKnown RBP13.74□□□□□ -0.21
CAPN1-209ENST00000527469 STK19P49842 368 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-209ENST00000527469 PLK1P53350 603 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 CAMK2GQ13555 558 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-209ENST00000527469 TTC31Q49AM3 519 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-209ENST00000527469 ZNF776Q68DI1 518 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-209ENST00000527469 SARM1Q6SZW1 724 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 ARMCX6Q7L4S7 300 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 CYP2U1Q7Z449 544 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 ZNF354CQ86Y25 554 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 DNAJC7Q99615 494 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 NCAPGQ9BPX3 1015 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 ANP32EQ9BTT0 268 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 MKRN2Q9H000 416 aaKnown RBP13.74□□□□□ -0.21
CAPN1-209ENST00000527469 PRSS16Q9NQE7 514 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 ABHD10Q9NUJ1 306 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 ARHGAP20Q9P2F6 1191 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 PCDHGA5Q9Y5G8 931 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 SPTBN4Q9H254 2564 aa13.74□□□□□ -0.21
CAPN1-209ENST00000527469 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.73□□□□□ -0.21
CAPN1-209ENST00000527469 ILVBLA1L0T0 632 aa13.73□□□□□ -0.21
CAPN1-209ENST00000527469 TARSL2A2RTX5 802 aaKnown RBP13.73□□□□□ -0.21
CAPN1-209ENST00000527469 TTC34A8MYJ7 566 aa13.73□□□□□ -0.21
CAPN1-209ENST00000527469 AKR1B15C9JRZ8 316 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-209ENST00000527469 CBX4O00257 560 aa13.73□□□□□ -0.21
CAPN1-209ENST00000527469 FOXD2O60548 495 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-209ENST00000527469 MFAP3LO75121 409 aa13.73□□□□□ -0.21
CAPN1-209ENST00000527469 SIN3BO75182 1162 aa13.73□□□□□ -0.21
CAPN1-209ENST00000527469 RHOQP17081 205 aa13.73□□□□□ -0.21
CAPN1-209ENST00000527469 EPHB2P29323 1055 aa13.73□□□□□ -0.21
CAPN1-209ENST00000527469 CD6P30203 668 aa13.73□□□□□ -0.21
CAPN1-209ENST00000527469 ETFBP38117 255 aa13.73□□□□□ -0.21
CAPN1-209ENST00000527469 ADKP55263 362 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms