RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 CCNYQ8ND76 341 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 CD99L2Q8TCZ2 262 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 HTR3CQ8WXA8 447 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 LENG8Q96PV6 779 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-208ENST00000527323 LGMNQ99538 433 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 PTPRHQ9HD43 1115 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 NDUFA13Q9P0J0 144 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 MAGED2Q9UNF1 606 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-208ENST00000527323 CDY2AQ9Y6F7 541 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 CDY1Q9Y6F8 540 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 SF3B1O75533 1304 aaKnown RBP eCLIP12.8□□□□□ -0.363e-6■■■■■ 68.7
CAPN1-208ENST00000527323 ARID2Q68CP9 1835 aa12.8□□□□□ -0.36
CAPN1-208ENST00000527323 LOC285556D6RIA3 1793 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 H3BRB1 525 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 DGKIO75912 1065 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 TOMM70O94826 608 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 SPATA31D3P0C874 917 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 HDAC4P56524 1084 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 MAP2K5Q13163 448 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 SEMA5AQ13591 1074 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 ARMC3Q5W041 872 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 CXCL17Q6UXB2 119 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 SPATA31D4Q6ZUB0 917 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 ACOT1Q86TX2 421 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 ZNF781Q8N8C0 355 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 TRIB2Q92519 343 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 DGCR14Q96DF8 476 aaKnown RBP12.79□□□□□ -0.36
CAPN1-208ENST00000527323 OXCT2Q9BYC2 517 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-208ENST00000527323 TUT1Q9H6E5 874 aaKnown RBP12.79□□□□□ -0.36
CAPN1-208ENST00000527323 CDHR5Q9HBB8 845 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 HESX1Q9UBX0 185 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 SSX2IPQ9Y2D8 614 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 MFHAS1Q9Y4C4 1052 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 ZBTB14O43829 449 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 F7P08709 466 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-208ENST00000527323 PROZP22891 400 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 CBLBQ13191 982 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 TLR1Q15399 786 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 SLC9B1Q4ZJI4 515 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 PPP1R26Q5T8A7 1209 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-208ENST00000527323 IYDQ6PHW0 289 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 UGT2A3Q6UWM9 527 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 RBM44Q6ZP01 1051 aaKnown RBP12.79□□□□□ -0.36
CAPN1-208ENST00000527323 TMC7Q7Z402 723 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 KBTBD6Q86V97 674 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 PQLC1Q8N2U9 271 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 SREK1Q8WXA9 508 aaKnown RBP12.79□□□□□ -0.36
CAPN1-208ENST00000527323 DCUN1D1Q96GG9 259 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 CNBD2Q96M20 576 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 BTBD9Q96Q07 612 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 SERPINI1Q99574 410 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 FZD8Q9H461 694 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 ATXN10Q9UBB4 475 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 MORF4L1Q9UBU8 362 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 APPL1Q9UKG1 709 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 AP4E1Q9UPM8 1137 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 RPS6KL1Q9Y6S9 549 aa12.79□□□□□ -0.36
CAPN1-208ENST00000527323 MDM4O15151 490 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 ATICP31939 592 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 MTTPP55157 894 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 GRM2Q14416 872 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 OLFML1Q6UWY5 402 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 TRPV1Q8NER1 839 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 CDRT15Q96T59 188 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 KATNBL1Q9H079 304 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 ACSS2Q9NR19 701 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 PSMD13Q9UNM6 376 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 LZTS1Q9Y250 596 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 A0A087WZ62 844 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 H3BNX3 289 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 PYGLP06737 847 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 PFKMP08237 780 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 PGAM1P18669 254 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 ABCG1P45844 678 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 RPL5P46777 297 aaKnown RBP12.78□□□□□ -0.36
CAPN1-208ENST00000527323 NR2C2P49116 596 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 VEGFBP49765 207 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 MRPS22P82650 360 aaKnown RBP12.78□□□□□ -0.36
CAPN1-208ENST00000527323 NIPAL4Q0D2K0 466 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 TLK2Q86UE8 772 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 GALNT4Q8N4A0 578 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 RNF148Q8N7C7 305 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 PGLYRP2Q96PD5 576 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 FDXACB1Q9BRP7 624 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-208ENST00000527323 RTKNQ9BST9 563 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 CXCL16Q9H2A7 254 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 SYBUQ9NX95 663 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 DTLQ9NZJ0 730 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 TNFSF13BQ9Y275 285 aa12.78□□□□□ -0.36
CAPN1-208ENST00000527323 A0A0A0MRY4 1105 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 ZNF195O14628 629 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 STRNO43815 780 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 ALDH1A2O94788 518 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 CCND3P30281 292 aaPredicted RBP12.77□□□□□ -0.36
CAPN1-208ENST00000527323 GP5P40197 560 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 HARS2P49590 506 aaKnown RBP12.77□□□□□ -0.36
CAPN1-208ENST00000527323 BTKQ06187 659 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 INSCQ1MX18 579 aa12.77□□□□□ -0.36
CAPN1-208ENST00000527323 RARS2Q5T160 578 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms