RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 DNAAF2Q9NVR5 837 aaKnown RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 EIF2B4Q9UI10 523 aaKnown RBP10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 VANGL2Q9ULK5 521 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 WASF3Q9UPY6 502 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 CEP83Q9Y592 693 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 CACNA1BQ00975 2339 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 ITIH6Q6UXX5 1313 aa10.76□□□□□ -0.69
PRPF40B-204ENST00000527253 A0A1B0GVM2 712 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 SPAARA0A1B0GVQ0 90 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 TARSL2A2RTX5 802 aaKnown RBP10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 TCAF2A6NFQ2 919 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 LRRC10BA6NIK2 292 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 UPK3BL1B0FP48 263 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 C10orf142B7Z368 130 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 UPK3BL2E5RIL1 263 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 GOLGA8SH3BPF8 625 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 MID1O15344 667 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 GJB6O95452 261 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 SEMA4FO95754 770 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 LSM8O95777 96 aaKnown RBP10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 DNTTP04053 509 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 CEACAM1P13688 526 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 GNSP15586 552 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 SOX5P35711 763 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 METAP1P53582 386 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 SNX16P57768 344 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 CDR2Q01850 454 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 ZBTB16Q05516 673 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 ZNF252P-AS1Q0IIN9 211 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 GRIK2Q13002 908 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 SYCP1Q15431 976 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 SLC25A52Q3SY17 297 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 ALFQ53S48 1182 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 RABGAP1LQ5R372 815 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 FAM102AQ5T9C2 384 aaPredicted RBP10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 MMAAQ8IVH4 418 aaKnown RBP10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 CCDC117Q8IWD4 279 aaPredicted RBP10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 BIRC7Q96CA5 298 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 CAMK1GQ96NX5 476 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 FEM1AQ9BSK4 669 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 BTBD1Q9H0C5 482 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 TKTL2Q9H0I9 626 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 SIK2Q9H0K1 926 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 PCED1AQ9H1Q7 454 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 NEUROG2Q9H2A3 272 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 WDCPQ9H6R7 721 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 IL21RQ9HBE5 538 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 ANO10Q9NW15 660 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 SUSD2Q9UGT4 822 aa10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.75□□□□□ -0.69
PRPF40B-204ENST00000527253 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 EDDM13A0A1B0GTR0 161 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 A0A1B0GVT2 93 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 A0A1W2PP55 124 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 DRGXA6NNA5 263 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 LGALS16A8MUM7 142 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 BCAT2O15382 392 aaPredicted RBP10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 OPHN1O60890 802 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 FSBPO95073 299 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 MOCS3O95396 460 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 IGHV4-34P06331 123 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 SYPP08247 313 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 ATP1A3P13637 1013 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 SPINK2P20155 84 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 MMP8P22894 467 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 SLC8A1P32418 973 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 CSNK1EP49674 416 aaKnown RBP10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 ATXN3P54252 364 aaPredicted RBP10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 SHC2P98077 582 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 MYL5Q02045 173 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 DEUP1Q05D60 604 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 PTP4A2Q12974 167 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 ZNF177Q13360 481 aaPredicted RBP10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 SLC12A1Q13621 1099 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 CST6Q15828 149 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 STX1AQ16623 288 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 KCNT1Q5JUK3 1230 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 BRMS1LQ5PSV4 323 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 FKBP15Q5T1M5 1219 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 TTC39BQ5VTQ0 682 aaPredicted RBP10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 RNF219Q5W0B1 726 aaPredicted RBP10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 SASS6Q6UVJ0 657 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 USP30Q70CQ3 517 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 AADATQ8N5Z0 425 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 EMC1Q8N766 993 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 SLC30A5Q8TAD4 765 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 CFAP57Q96MR6 1250 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 PSMB7Q99436 277 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 MAGEB5Q9BZ81 275 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 EBF2Q9HAK2 575 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 SGK2Q9HBY8 427 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 FBXL12Q9NXK8 326 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 RRN3Q9NYV6 651 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 TMEM63CQ9P1W3 806 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 ANGPTL2Q9UKU9 493 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 STAP1Q9ULZ2 295 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 TBC1D30Q9Y2I9 924 aa10.74□□□□□ -0.69
PRPF40B-204ENST00000527253 USP24Q9UPU5 2620 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 RNF103O00237 685 aa10.73□□□□□ -0.69
PRPF40B-204ENST00000527253 PLK4O00444 970 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms