RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 BPTFQ12830 3046 aa13.82□□□□□ -0.2
CAPN1-207ENST00000527189 IGSF10Q6WRI0 2623 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-207ENST00000527189 CLDN11O75508 207 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 TRIM16O95361 564 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 CER1O95813 267 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 TPM2P07951 284 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 PNMA6AP0CW24 399 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-207ENST00000527189 CD27P26842 260 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 CXCR3P49682 368 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 NME3Q13232 169 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 ZNF177Q13360 481 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-207ENST00000527189 CST6Q15828 149 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 HSP90AA4PQ58FG1 418 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 SND1Q7KZF4 910 aaKnown RBP eCLIP13.81□□□□□ -0.2
CAPN1-207ENST00000527189 ARCQ7LC44 396 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 ZNF677Q86XU0 584 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 ZCCHC9Q8N567 271 aaKnown RBP13.81□□□□□ -0.2
CAPN1-207ENST00000527189 C1orf74Q96LT6 269 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 RPRD1AQ96P16 312 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-207ENST00000527189 GBP4Q96PP9 640 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 C6orf106Q9H6K1 298 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-207ENST00000527189 WDCPQ9H6R7 721 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 FBXL12Q9NXK8 326 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 ARHGEF38Q9NXL2 777 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 ADAMTS1Q9UHI8 967 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 SLCO3A1Q9UIG8 710 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 FZD4Q9ULV1 537 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 HS3ST4Q9Y661 456 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 FREM2Q5SZK8 3169 aa13.81□□□□□ -0.2
CAPN1-207ENST00000527189 SYNJ2BP-COX16A0A087WUM0 186 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 TTC34A8MYJ7 566 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 F8VZ95 297 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 PAGE1O75459 146 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 ADH1BP00325 375 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 C5AR1P21730 350 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 CTSOP43234 321 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-207ENST00000527189 CDH4P55283 916 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 ELAVL3Q14576 367 aaKnown RBP13.8□□□□□ -0.2
CAPN1-207ENST00000527189 TEAD4Q15561 434 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 SLC25A52Q3SY17 297 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 CDKAL1Q5VV42 579 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 CXorf57Q6NSI4 855 aaKnown RBP13.8□□□□□ -0.2
CAPN1-207ENST00000527189 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 DHX40Q8IX18 779 aaKnown RBP13.8□□□□□ -0.2
CAPN1-207ENST00000527189 PTPRN2Q92932 1015 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 BIRC7Q96CA5 298 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 FAM129BQ96TA1 746 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 FEM1AQ9BSK4 669 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 MTG2Q9H4K7 406 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 COX16Q9P0S2 106 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 TBC1D30Q9Y2I9 924 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 ADAMTS9Q9P2N4 1935 aa13.8□□□□□ -0.2
CAPN1-207ENST00000527189 LRRC72A6NJI9 287 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 GOLGA6L22H0YM25 854 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 PROS1P07225 676 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 PDGFRAP16234 1089 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 MZF1P28698 734 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-207ENST00000527189 SLC8A1P32418 973 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 GRIA4P48058 902 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 GALCP54803 685 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 RNASE9P60153 205 aaKnown RBP13.79□□□□□ -0.2
CAPN1-207ENST00000527189 SIM1P81133 766 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-207ENST00000527189 FOXC1Q12948 553 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 HLA-BQ31612 363 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 FKBP15Q5T1M5 1219 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 KIAA0895LQ68EN5 471 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 LRRC31Q6UY01 552 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 DBX2Q6ZNG2 339 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 NOP9Q86U38 636 aaKnown RBP13.79□□□□□ -0.2
CAPN1-207ENST00000527189 XYLT1Q86Y38 959 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 MMAAQ8IVH4 418 aaKnown RBP13.79□□□□□ -0.2
CAPN1-207ENST00000527189 OR2I1PQ8NGU4 316 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 GANCQ8TET4 914 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 IGSF8Q969P0 613 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 ALG14Q96F25 216 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 RPL10LQ96L21 214 aaKnown RBP13.79□□□□□ -0.2
CAPN1-207ENST00000527189 SPAG5Q96R06 1193 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 OMDQ99983 421 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 TKTL2Q9H0I9 626 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 NEUROG2Q9H2A3 272 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 GAREM1Q9H706 876 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 PIGVQ9NUD9 493 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 TAB2Q9NYJ8 693 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 VANGL2Q9ULK5 521 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 PCDHB9Q9Y5E1 797 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 PCDHGB2Q9Y5G2 931 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 OR51B4Q9Y5P0 310 aa13.79□□□□□ -0.2
CAPN1-207ENST00000527189 LRRC10BA6NIK2 292 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 DRGXA6NNA5 263 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 C10orf142B7Z368 130 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 MID1O15344 667 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 ATP9BO43861 1147 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 SH3BP5O60239 455 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 DFNA5O60443 496 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 FSBPO95073 299 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 ADCY5O95622 1261 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 GOT1P17174 413 aa13.78□□□□□ -0.2
CAPN1-207ENST00000527189 CSNK1EP49674 416 aaKnown RBP13.78□□□□□ -0.2
CAPN1-207ENST00000527189 SULT1E1P49888 294 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms