RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 NRDCO43847 1150 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 EPHB2P29323 1055 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 GJC1P36383 396 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 MARCKSL1P49006 195 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 HCAR3P49019 387 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 MAPKAPK2P49137 400 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 ZNF135P52742 658 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-204ENST00000527149 PLK1P53350 603 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 ZNF177Q13360 481 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-204ENST00000527149 PITRM1Q5JRX3 1037 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 EGFLAMQ63HQ2 1017 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 RFX8Q6ZV50 586 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 APCDD1Q8J025 514 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 TTC17Q96AE7 1141 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 CSPG4P5Q96PW8 444 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 LRFN3Q9BTN0 628 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 TSGA10Q9BZW7 698 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 KLC2Q9H0B6 622 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 C2orf42Q9NWW7 574 aa17.1■□□□□ 0.33
SMCO4-204ENST00000527149 KIAA1522Q9P206 1035 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-204ENST00000527149 VPS13AQ96RL7 3174 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 C3orf70A6NLC5 250 aaPredicted RBP17.09■□□□□ 0.33
SMCO4-204ENST00000527149 CHURC1-FNTBB4DL54 471 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 NCAM2O15394 837 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 FGF10O15520 208 aaPredicted RBP17.09■□□□□ 0.33
SMCO4-204ENST00000527149 PSTPIP1O43586 416 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 SPOPO43791 374 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 MOCS3O95396 460 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 RHOCP08134 193 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 KRT7P08729 469 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 SSR1P43307 286 aaKnown RBP17.09■□□□□ 0.33
SMCO4-204ENST00000527149 MAGEA9P43362 315 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 CDH6P55285 790 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 SEC13P55735 322 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 SLC12A1Q13621 1099 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 ENPP2Q13822 863 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 DPYSL3Q14195 570 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 PTPRNQ16849 979 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 MBLAC2Q68D91 279 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 DAAM2Q86T65 1068 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 IL17RCQ8NAC3 791 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 SORCS1Q8WY21 1168 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 RAPGEF5Q92565 580 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 KRT35Q92764 455 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 FAF2Q96CS3 445 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 MYO19Q96H55 970 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 PSMB7Q99436 277 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 FEM1AQ9BSK4 669 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 IER2Q9BTL4 223 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 ZDHHC4Q9NPG8 344 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 ELOVL2Q9NXB9 296 aa17.09■□□□□ 0.33
SMCO4-204ENST00000527149 RCOR3Q9P2K3 495 aaPredicted RBP17.09■□□□□ 0.33
SMCO4-204ENST00000527149 NYNRINQ9P2P1 1898 aaKnown RBP17.09■□□□□ 0.33
SMCO4-204ENST00000527149 A0A0D9SEW6 157 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 ILVBLA1L0T0 632 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 H3BRJ5 948 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 DCLK1O15075 740 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 ADAM23O75077 832 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 HNRNPLP14866 589 aaKnown RBP eCLIP17.08■□□□□ 0.32
SMCO4-204ENST00000527149 AVPR2P30518 371 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 OR1E1P30953 314 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 OXCT1P55809 520 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 MRPS21P82921 87 aaKnown RBP17.08■□□□□ 0.32
SMCO4-204ENST00000527149 MTAPQ13126 283 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 MMRN1Q13201 1228 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 DMC1Q14565 340 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 C6orf118Q5T5N4 469 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 AFMIDQ63HM1 303 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 ZNF783Q6ZMS7 281 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 MAMSTRQ6ZN01 415 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 RHOT1Q8IXI2 618 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 UMODL1-AS1Q8N2C9 162 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 RNF10Q8N5U6 811 aaKnown RBP17.08■□□□□ 0.32
SMCO4-204ENST00000527149 NPWQ8N729 165 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 RPLP0P6Q8NHW5 317 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 KCNV2Q8TDN2 545 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 MRGPRX3Q96LB0 322 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 ACOX2Q99424 681 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 ZNF670Q9BS34 389 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 ETNK2Q9NVF9 386 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 MFHAS1Q9Y4C4 1052 aa17.08■□□□□ 0.32
SMCO4-204ENST00000527149 ZNF487B1APH4 448 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 KRT86O43790 486 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 PALMO75781 387 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 ERCC2P18074 760 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
SMCO4-204ENST00000527149 CTSOP43234 321 aaPredicted RBP17.07■□□□□ 0.32
SMCO4-204ENST00000527149 NUMBP49757 651 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 PDK2Q15119 407 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 TAZQ16635 292 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 C2orf27AQ580R0 203 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 RNF219Q5W0B1 726 aaPredicted RBP17.07■□□□□ 0.32
SMCO4-204ENST00000527149 NT5DC3Q86UY8 548 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 CCDC117Q8IWD4 279 aaPredicted RBP17.07■□□□□ 0.32
SMCO4-204ENST00000527149 ARHGAP12Q8IWW6 846 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 ALLCQ8N6M5 410 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 ZNF513Q8N8E2 541 aaPredicted RBP17.07■□□□□ 0.32
SMCO4-204ENST00000527149 DCAF4L2Q8NA75 395 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 OR7D4Q8NG98 312 aa17.07■□□□□ 0.32
SMCO4-204ENST00000527149 CYB5D2Q8WUJ1 264 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms