RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 TP53INP2Q8IXH6 220 aa21.73■■□□□ 1.07
VPS28-205ENST00000526204 ULK2Q8IYT8 1036 aa21.73■■□□□ 1.07
VPS28-205ENST00000526204 PPFIBP2Q8ND30 876 aa21.73■■□□□ 1.07
VPS28-205ENST00000526204 ZNF669Q96BR6 464 aaPredicted RBP21.73■■□□□ 1.07
VPS28-205ENST00000526204 AGAP3Q96P47 875 aa21.73■■□□□ 1.07
VPS28-205ENST00000526204 SYT15Q9BQS2 421 aa21.73■■□□□ 1.07
VPS28-205ENST00000526204 GBA3Q9H227 469 aa21.73■■□□□ 1.07
VPS28-205ENST00000526204 DONSONQ9NYP3 566 aa21.73■■□□□ 1.07
VPS28-205ENST00000526204 SOX13Q9UN79 622 aa21.73■■□□□ 1.07
VPS28-205ENST00000526204 IQCA1LA6NCM1 817 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 AP3B1O00203 1094 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 LTFP02788 710 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 MPOP05164 745 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 MYL3P08590 195 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 SERPINB6P35237 376 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 NPY2RP49146 381 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 UBAP2LQ14157 1087 aaKnown RBP21.72■■□□□ 1.07
VPS28-205ENST00000526204 ANKRD20A4Q4UJ75 823 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 RABGAP1LQ5R372 815 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 STRA8Q7Z7C7 330 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 DCLK2Q8N568 766 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 FBXO27Q8NI29 283 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 ZFP42Q96MM3 310 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 SMOQ99835 787 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 GORASP1Q9BQQ3 440 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 THTPAQ9BU02 230 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 DDIT4Q9NX09 232 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 PTCH2Q9Y6C5 1203 aa21.72■■□□□ 1.07
VPS28-205ENST00000526204 CYP2B6P20813 491 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 ADAM32Q8TC27 787 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 SREK1Q8WXA9 508 aaKnown RBP21.71■■□□□ 1.07
VPS28-205ENST00000526204 SORT1Q99523 831 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 FAM167BQ9BTA0 163 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 AP5M1Q9H0R1 490 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 IL1RAPL1Q9NZN1 696 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 ANGPTL2Q9UKU9 493 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 ZCWPW2A0A1B0GU75 182 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 ZBTB24O43167 697 aaPredicted RBP21.71■■□□□ 1.07
VPS28-205ENST00000526204 ZNF865P0CJ78 1059 aaPredicted RBP21.71■■□□□ 1.07
VPS28-205ENST00000526204 SKIP12755 728 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 MRPS35P82673 323 aaKnown RBP21.71■■□□□ 1.07
VPS28-205ENST00000526204 GALNT2Q10471 571 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 MAP2K5Q13163 448 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 MICAL1Q8TDZ2 1067 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 EPAS1Q99814 870 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 COLEC11Q9BWP8 271 aa21.71■■□□□ 1.07
VPS28-205ENST00000526204 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.71■■□□□ 1.07
VPS28-205ENST00000526204 IDH3AP50213 366 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 ACTR3P61158 418 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 MORN1Q5T089 497 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 FSTL4Q6MZW2 842 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 OR6Y1Q8NGX8 325 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 SCG3Q8WXD2 468 aaKnown RBP21.7■■□□□ 1.06
VPS28-205ENST00000526204 PCED1BQ96HM7 432 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 OSBPL1AQ9BXW6 950 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 ANLNQ9NQW6 1124 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 DNAJB4Q9UDY4 337 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 CDH9Q9ULB4 789 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 Q9Y3F1 56 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 TIMM44O43615 452 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 SIN3BO75182 1162 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 USP12O75317 370 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 USP17L7P0C7H9 530 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 CSE1LP55060 971 aaKnown RBP21.7■■□□□ 1.06
VPS28-205ENST00000526204 FKBP1BP68106 108 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 ANO7Q6IWH7 933 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 TAF2Q6P1X5 1199 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 DTX3LQ8TDB6 740 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 NRG4Q8WWG1 115 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 LENG1Q96BZ8 264 aaPredicted RBP21.7■■□□□ 1.06
VPS28-205ENST00000526204 IL22Q9GZX6 179 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 WDCPQ9H6R7 721 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 SUFUQ9UMX1 484 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 LRCH1Q9Y2L9 728 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 CDY2AQ9Y6F7 541 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 CDY1Q9Y6F8 540 aa21.7■■□□□ 1.06
VPS28-205ENST00000526204 GLTPD2A6NH11 291 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 I6L893 689 aaPredicted RBP21.69■■□□□ 1.06
VPS28-205ENST00000526204 H2AFYO75367 372 aaKnown RBP21.69■■□□□ 1.06
VPS28-205ENST00000526204 DNAJB2P25686 324 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 HOXC8P31273 242 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 CPOXP36551 454 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 HADHAP40939 763 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 OLIG2Q13516 323 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 RIPOR1Q6ZS17 1223 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 CMC1Q7Z7K0 106 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 NPWQ8N729 165 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 ZMIZ2Q8NF64 920 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 KCNK16Q96T55 309 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 PTPN18Q99952 460 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 GPAMQ9HCL2 828 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 PNPOQ9NVS9 261 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 SLC7A8Q9UHI5 535 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 PCDHB12Q9Y5F1 795 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 TSC2P49815 1807 aa21.69■■□□□ 1.06
VPS28-205ENST00000526204 ZNF236Q9UL36 1845 aa21.68■■□□□ 1.06
VPS28-205ENST00000526204 MYBPHLA2RUH7 354 aa21.68■■□□□ 1.06
VPS28-205ENST00000526204 THP07101 528 aa21.68■■□□□ 1.06
VPS28-205ENST00000526204 C6orf222P0C671 652 aaPredicted RBP21.68■■□□□ 1.06
VPS28-205ENST00000526204 CDC25CP30307 473 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms