RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 THUMPD3Q9BV44 507 aaKnown RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 FUT8Q9BYC5 575 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZCWPW1Q9H0M4 648 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 KAT14Q9H8E8 782 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SYNPO2LQ9H987 977 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 PFDN4Q9NQP4 134 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 HCN3Q9P1Z3 774 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SUCLA2Q9P2R7 463 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 DNMT3BQ9UBC3 853 aaKnown RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 HECAQ9UBI9 543 aaPredicted RBP3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 CACNG4Q9UBN1 327 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 BTBD3Q9Y2F9 522 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 TBC1D30Q9Y2I9 924 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 CDY1Q9Y6F8 540 aa3.23□□□□□ -1.89
TRAPPC4-207ENST00000526141 SH2D7A6NKC9 451 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SLC38A8A6NNN8 435 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 C16orf96A6NNT2 1141 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 H0YAE9 185 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 GCOM1H8Y6P7 765 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 M0QYG6 137 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 PSMD14O00487 310 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 CAPN9O14815 690 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZSCAN9O15535 394 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ASAP2O43150 1006 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 HAUS5O94927 633 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 CER1O95813 267 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 EIF2S1P05198 315 aaKnown RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 PCP11498 1178 aaKnown RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 RARGP13631 454 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ALADP13716 330 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 GAP43P17677 238 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 PTPN2P17706 415 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 FGFR4P22455 802 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SP100P23497 879 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 PRKCHP24723 683 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 HOXC8P31273 242 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ICAM3P32942 547 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 PNPLA4P41247 253 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SCNN1GP51170 649 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZNF135P52742 658 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 CDH15P55291 814 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 RRP1P56182 461 aaKnown RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SATB1Q01826 763 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ACTN3Q08043 901 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 COASYQ13057 564 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 TDGQ13569 410 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 TOB2Q14106 344 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 IRF3Q14653 427 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SMU1Q2TAY7 513 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ZNF628Q5EBL2 1059 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 CACHD1Q5VU97 1274 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SHQ1Q6PI26 577 aaKnown RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 TRAT1Q6PIZ9 186 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 CHST9Q7L1S5 443 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 BHLHA9Q7RTU4 235 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 PPP1R32Q7Z5V6 425 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 GLCCI1Q86VQ1 547 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 BCL6BQ8N143 479 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 OTUD6BQ8N6M0 293 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SYT2Q8N9I0 419 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 POC5Q8NA72 575 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 FBXO18Q8NFZ0 1043 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 NLGN4YQ8NFZ3 816 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 OR6J1Q8NGC5 347 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 RFWD2Q8NHY2 731 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 MBD3L2Q8NHZ7 208 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SLC2A12Q8TD20 617 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ARHGEF2Q92974 986 aaKnown RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ATP6V0A1Q93050 837 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SIPA1Q96FS4 1042 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 BICD1Q96G01 975 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 CEP95Q96GE4 821 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 CMTM3Q96MX0 182 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 GCNAQ96QF7 691 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ABHD1Q96SE0 405 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 LBHD1Q9BQE6 289 aaPredicted RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SLC46A2Q9BY10 475 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 TNMDQ9H2S6 317 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SERHL2Q9H4I8 314 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 OPA3Q9H6K4 179 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SH2D4AQ9H788 454 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 RMI1Q9H9A7 625 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 AGO3Q9H9G7 860 aaKnown RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 PLEKHA2Q9HB19 425 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 MPP6Q9NZW5 540 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 DNAJB9Q9UBS3 223 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 DNAJB11Q9UBS4 358 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 MAGEL2Q9UJ55 1249 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 CDH22Q9UJ99 828 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 SH3BGRL2Q9UJC5 107 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 DUSP12Q9UNI6 340 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 DRG1Q9Y295 367 aaKnown RBP3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 VWA7Q9Y334 891 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 ABCC9O60706 1549 aa3.22□□□□□ -1.89
TRAPPC4-207ENST00000526141 XDHP47989 1333 aa3.21□□□□□ -1.89
TRAPPC4-207ENST00000526141 RUSC2Q8N2Y8 1516 aa3.21□□□□□ -1.9
TRAPPC4-207ENST00000526141 SYNJ2BP-COX16A0A087WUM0 186 aa3.21□□□□□ -1.9
TRAPPC4-207ENST00000526141 hCG_1809904A0A1W2PP81 198 aa3.21□□□□□ -1.9
TRAPPC4-207ENST00000526141 A0A1W2PPE2 198 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms