RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 LRIG2O94898 1065 aa20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 MOCS3O95396 460 aa20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 LMNAP02545 664 aaKnown RBP20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 SRPRAP08240 638 aaKnown RBP20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 L1CAMP32004 1257 aa20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 SEMA3BQ13214 749 aa20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 CAMK2GQ13555 558 aaPredicted RBP20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 ACAP1Q15027 740 aa20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 SCYL2Q6P3W7 929 aa20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 SERPINA13PQ6UXR4 307 aa20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 CYP4V2Q6ZWL3 525 aaPredicted RBP20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 NLRP14Q86W24 1093 aa20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 PPP1R9BQ96SB3 815 aa20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 ERVW-1Q9UQF0 538 aa20.33■□□□□ 0.85
EXOSC4-202ENST00000525936 RPP40O75818 363 aaKnown RBP20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 PCK1P35558 622 aa20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 CTSOP43234 321 aaPredicted RBP20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 ECT2LQ008S8 904 aa20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 SULT2A1Q06520 285 aa20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 PYROXD2Q8N2H3 581 aa20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 NIPA2Q8N8Q9 360 aa20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 HMGB4Q8WW32 186 aa20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 ZC3H10Q96K80 434 aaKnown RBP20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 MRGPRX1Q96LB2 322 aa20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 CCDC42Q96M95 316 aa20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 NCAPGQ9BPX3 1015 aa20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 EP300Q09472 2414 aaPredicted RBP20.32■□□□□ 0.84
EXOSC4-202ENST00000525936 AKR1B10O60218 316 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 LRCH4O75427 683 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 RNF8O76064 485 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 EPHX1P07099 455 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 RHOQP17081 205 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 DESP17661 470 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 NDUFV2P19404 249 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 MIPP30301 263 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 MRE11P49959 708 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 COPAP53621 1224 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 STARD3Q14849 445 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 MAP7D1Q3KQU3 841 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 FNDC3BQ53EP0 1204 aaKnown RBP20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 EFHC2Q5JST6 749 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 C6orf118Q5T5N4 469 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 RNF219Q5W0B1 726 aaPredicted RBP20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 ZNF783Q6ZMS7 281 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 METTL3Q86U44 580 aaKnown RBP20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 PEBP4Q96S96 227 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 NUP85Q9BW27 656 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 PACSIN1Q9BY11 444 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 TPSD1Q9BZJ3 242 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 MKRN2Q9H000 416 aaKnown RBP20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 DEF6Q9H4E7 631 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 SLCO3A1Q9UIG8 710 aa20.31■□□□□ 0.84
EXOSC4-202ENST00000525936 ILVBLA1L0T0 632 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 SYNCRIPO60506 623 aaKnown RBP20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 HLA-EP13747 358 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 FECHP22830 423 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 OR1E1P30953 314 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 HOXD11P31277 338 aaPredicted RBP20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 P2RY2P41231 377 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 SIM2Q14190 667 aaPredicted RBP20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 PIGHQ14442 188 aaPredicted RBP20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 HNRNPA1L2Q32P51 320 aaKnown RBP20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 USP39Q53GS9 565 aaKnown RBP20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 ERMARDQ5T6L9 678 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 TFAP2DQ7Z6R9 452 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 PSTKQ8IV42 348 aaKnown RBP20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 TBC1D31Q96DN5 1066 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 PSMB7Q99436 277 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 PRSS16Q9NQE7 514 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 NDFIP2Q9NV92 336 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 TMEM248Q9NWD8 314 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 SUN2Q9UH99 717 aa20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 SMG5Q9UPR3 1016 aaKnown RBP20.3■□□□□ 0.84
EXOSC4-202ENST00000525936 A0A0D9SEW6 157 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 EIF3CLB5ME19 914 aaKnown RBP20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 RHOCP08134 193 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 H2AFZP0C0S5 128 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 TMEM253P0C7T8 217 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 H2AFVQ71UI9 128 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 ZNF366Q8N895 744 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 PANX2Q96RD6 677 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 EIF3CQ99613 913 aaKnown RBP20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 SLC6A17Q9H1V8 727 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 SPTLC3Q9NUV7 552 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 BCCIPQ9P287 314 aaKnown RBP eCLIP20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 UVRAGQ9P2Y5 699 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 PCSK1NQ9UHG2 260 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 USP18Q9UMW8 372 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 GVINP1Q7Z2Y8 2422 aa20.29■□□□□ 0.84
EXOSC4-202ENST00000525936 FAM186AA6NE01 2351 aa20.28■□□□□ 0.84
EXOSC4-202ENST00000525936 PLXND1Q9Y4D7 1925 aa20.28■□□□□ 0.84
EXOSC4-202ENST00000525936 WASH4PA8MWX3 477 aa20.28■□□□□ 0.84
EXOSC4-202ENST00000525936 DCLK1O15075 740 aa20.28■□□□□ 0.84
EXOSC4-202ENST00000525936 LCA5LO95447 670 aa20.28■□□□□ 0.84
EXOSC4-202ENST00000525936 IL1R2P27930 398 aa20.28■□□□□ 0.84
EXOSC4-202ENST00000525936 HTR7P34969 479 aa20.28■□□□□ 0.84
EXOSC4-202ENST00000525936 MAPKAPK2P49137 400 aa20.28■□□□□ 0.84
EXOSC4-202ENST00000525936 ST8SIA6P61647 398 aa20.28■□□□□ 0.84
EXOSC4-202ENST00000525936 CA9Q16790 459 aa20.28■□□□□ 0.84
EXOSC4-202ENST00000525936 C9orf64Q5T6V5 341 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms