RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 RAB6CQ53S08 254 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 PITRM1Q5JRX3 1037 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 PMS2CLQ68D20 193 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 CXorf57Q6NSI4 855 aaKnown RBP13.16□□□□□ -0.3
CLP1-202ENST00000525602 DNAJC24Q6P3W2 148 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 FAM131BQ86XD5 332 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 ZNF683Q8IZ20 524 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 MCOLN2Q8IZK6 566 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 TTC17Q96AE7 1141 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 MRGPRX1Q96LB2 322 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 SIK2Q9H0K1 926 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 RAB6CQ9H0N0 254 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 TMEM245Q9H330 911 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 TMPRSS4Q9NRS4 437 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 KIAA1522Q9P206 1035 aaPredicted RBP13.16□□□□□ -0.3
CLP1-202ENST00000525602 PLA2G4CQ9UP65 541 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 PCDHGA5Q9Y5G8 931 aa13.16□□□□□ -0.3
CLP1-202ENST00000525602 ADAMTS9Q9P2N4 1935 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 SYNCRIPO60506 623 aaKnown RBP13.15□□□□□ -0.3
CLP1-202ENST00000525602 RHOBTB1O94844 696 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 MOCS3O95396 460 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 ASLP04424 464 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 EPHX1P07099 455 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 GPD1P21695 349 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 RFC1P35251 1148 aaPredicted RBP13.15□□□□□ -0.3
CLP1-202ENST00000525602 COPAP53621 1224 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 KLHL30Q0D2K2 578 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 ZNF252P-AS1Q0IIN9 211 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 FOXC1Q12948 553 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 BYSLQ13895 437 aaKnown RBP13.15□□□□□ -0.3
CLP1-202ENST00000525602 PLEKHG6Q3KR16 790 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 SH3PXD2AQ5TCZ1 1133 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 PPP1R2P3Q6NXS1 205 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 KIAA1324Q6UXG2 1013 aaKnown RBP13.15□□□□□ -0.3
CLP1-202ENST00000525602 STRADAQ7RTN6 431 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 APCDD1Q8J025 514 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 FRMD1Q8N878 549 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 ZNF366Q8N895 744 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 MCEEQ96PE7 176 aa13.15□□□□□ -0.3
CLP1-202ENST00000525602 XPO4Q9C0E2 1151 aaKnown RBP13.15□□□□□ -0.3
CLP1-202ENST00000525602 MKRN2Q9H000 416 aaKnown RBP13.15□□□□□ -0.3
CLP1-202ENST00000525602 MBD1Q9UIS9 605 aaPredicted RBP13.15□□□□□ -0.3
CLP1-202ENST00000525602 ITPR1Q14643 2758 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 ITIH6Q6UXX5 1313 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 FASNP49327 2511 aaKnown RBP13.14□□□□□ -0.31
CLP1-202ENST00000525602 ANKRD11Q6UB99 2663 aaPredicted RBP13.14□□□□□ -0.31
CLP1-202ENST00000525602 BCLAF3A2AJT9 711 aaKnown RBP13.14□□□□□ -0.31
CLP1-202ENST00000525602 SIGLEC16A6NMB1 481 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 TMCO5BA8MYB1 307 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 DDX3XO00571 662 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLP1-202ENST00000525602 CLDN11O75508 207 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 CNTN5O94779 1100 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 SKILP12757 684 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 RRM1P23921 792 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 MZF1P28698 734 aaPredicted RBP13.14□□□□□ -0.31
CLP1-202ENST00000525602 CTSOP43234 321 aaPredicted RBP13.14□□□□□ -0.31
CLP1-202ENST00000525602 HDAC4P56524 1084 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 CAMK2GQ13555 558 aaPredicted RBP13.14□□□□□ -0.31
CLP1-202ENST00000525602 SLC12A1Q13621 1099 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 PPP1R15BQ5SWA1 713 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 ARTNQ5T4W7 220 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 ACBD5Q5T8D3 534 aaPredicted RBP13.14□□□□□ -0.31
CLP1-202ENST00000525602 WDR59Q6PJI9 974 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 FAM172AQ8WUF8 416 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 CENPIQ92674 756 aaPredicted RBP13.14□□□□□ -0.31
CLP1-202ENST00000525602 IQCDQ96DY2 449 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 MYO19Q96H55 970 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 VCPIP1Q96JH7 1222 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 MRGPRX3Q96LB0 322 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 C1orf74Q96LT6 269 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 HAPLN3Q96S86 360 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 PRDM16Q9HAZ2 1276 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 CD93Q9NPY3 652 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 CYP8B1Q9UNU6 501 aa13.14□□□□□ -0.31
CLP1-202ENST00000525602 IGLV3-10A0A075B6K4 115 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 IGHV1OR15-9A0A0B4J2B8 117 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 DRGXA6NNA5 263 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 E9PAM4 449 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 CCP110O43303 1012 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 ATMINO43313 823 aaPredicted RBP13.13□□□□□ -0.31
CLP1-202ENST00000525602 ZNF217O75362 1048 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 GYPCP04921 128 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 TPM3P06753 285 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 HOXB3P14651 431 aaPredicted RBP13.13□□□□□ -0.31
CLP1-202ENST00000525602 NUMBP49757 651 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 PLK1P53350 603 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 CDH4P55283 916 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 OXCT1P55809 520 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 ST8SIA6P61647 398 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 RPL7AP62424 266 aaKnown RBP13.13□□□□□ -0.31
CLP1-202ENST00000525602 ZBED6P86452 979 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 ALFQ53S48 1182 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
CLP1-202ENST00000525602 HGSNATQ68CP4 663 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 LRRC31Q6UY01 552 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 ARMCX6Q7L4S7 300 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 CACUL1Q86Y37 369 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 DNAAF5Q86Y56 855 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 TMPRSS6Q8IU80 811 aa13.13□□□□□ -0.31
CLP1-202ENST00000525602 RNF214Q8ND24 703 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms