RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 MFSD7Q6UXD7 560 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 LRIG3Q6UXM1 1119 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 SYNE3Q6ZMZ3 975 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 Q6ZVL8 140 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 BNIPLQ7Z465 357 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 SPATA19Q7Z5L4 167 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 KBTBD6Q86V97 674 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 FAM129CQ86XR2 697 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 CEP57Q86XR8 500 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 RFX6Q8HWS3 928 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 GLB1L2Q8IW92 636 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 SMYD4Q8IYR2 804 aaPredicted RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 ARL14Q8N4G2 192 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 ZNF366Q8N895 744 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 NIPA2Q8N8Q9 360 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 FAM133AQ8N9E0 248 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 XXYLT1Q8NBI6 393 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 TNIP2Q8NFZ5 429 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 NEK11Q8NG66 645 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 PSMA8Q8TAA3 256 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 MIEF2Q96C03 454 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 SAT2Q96F10 170 aaPredicted RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 NRBF2Q96F24 287 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 PGAM5Q96HS1 289 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 Q96M66 194 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 MGME1Q9BQP7 344 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 CCDC106Q9BWC9 280 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 B3GNT4Q9C0J1 378 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 TINAGL1Q9GZM7 467 aaPredicted RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 PITHD1Q9GZP4 211 aaPredicted RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 TTYH1Q9H313 450 aaPredicted RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 WDR26Q9H7D7 661 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 PLEKHA2Q9HB19 425 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 PIDD1Q9HB75 910 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 TMLHEQ9NVH6 421 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 HCN3Q9P1Z3 774 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 LRIT1Q9P2V4 623 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 DKK4Q9UBT3 224 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 CDH7Q9ULB5 785 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 PADI1Q9ULC6 663 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 AGAP1Q9UPQ3 857 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 TNFSF13BQ9Y275 285 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 COA3Q9Y2R0 106 aaPredicted RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 ADAM18Q9Y3Q7 739 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 SNX14Q9Y5W7 946 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 CAPN7Q9Y6W3 813 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 CLASP1Q7Z460 1538 aa4.65□□□□□ -1.67
CD44-213ENST00000525209 MYBBP1AQ9BQG0 1328 aaKnown RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 BRD4O60885 1362 aaPredicted RBP4.65□□□□□ -1.67
CD44-213ENST00000525209 A0A0A6YYJ9 748 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 GOLGA6L10A0A0M3HER8 536 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 TCRBV21S2A2A0A5A6 115 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 PRAMEF22A3QJZ6 481 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 EME2A4GXA9 379 aaPredicted RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 CDRT15L2A8MXV6 281 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 BTBD18B2RXH4 712 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 TO15178 435 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 GRM6O15303 877 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 DHHO43323 396 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 CYTIPO60759 359 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 RECQL4O94761 1208 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 SEC24DO94855 1032 aaPredicted RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 LARGE1O95461 756 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 DIRAS3O95661 229 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 GNAI2P04899 355 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 MPOP05164 745 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 CCDC172P0C7W6 258 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 PRLRP16471 622 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 ZFXP17010 805 aaPredicted RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 AGAP20933 346 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 CDH3P22223 829 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 CYP7A1P22680 504 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 SFPQP23246 707 aaKnown RBP eCLIP4.64□□□□□ -1.67
CD44-213ENST00000525209 PRKCHP24723 683 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 SREBF1P36956 1147 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 USP8P40818 1118 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 POU6F2P78424 691 aaPredicted RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 CYP4F8P98187 520 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 ACY1Q03154 408 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 TNK2Q07912 1038 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 IDI1Q13907 227 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 ZNF273Q14593 569 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 NOLC1Q14978 699 aaKnown RBP eCLIP4.64□□□□□ -1.67
CD44-213ENST00000525209 AAK1Q2M2I8 961 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 NKAPLQ5M9Q1 402 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 TEX35Q5T0J7 233 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 PRAMEF18Q5VWM3 479 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 FCRL6Q6DN72 434 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 HMBOX1Q6NT76 420 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 RBM43Q6ZSC3 357 aaKnown RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 ILDR2Q71H61 639 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 PARS2Q7L3T8 475 aaKnown RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 RHPN2Q8IUC4 686 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 RBM12BQ8IXT5 1001 aaKnown RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 FAM185AQ8N0U4 392 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 ZGPATQ8N5A5 531 aaKnown RBP4.64□□□□□ -1.67
CD44-213ENST00000525209 TMEM116Q8NCL8 245 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 OR52M1Q8NGK5 317 aa4.64□□□□□ -1.67
CD44-213ENST00000525209 HMGB4Q8WW32 186 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms