RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 ENDOD1O94919 500 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 CFIP05156 583 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 SRPRAP08240 638 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 KRT3P12035 628 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 VAV1P15498 845 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 PTMSP20962 102 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 SDC4P31431 198 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 RFC1P35251 1148 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 PLK1P53350 603 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 CDH4P55283 916 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 TPM4P67936 248 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 SLC12A1Q13621 1099 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 HNRNPA1L2Q32P51 320 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 C5orf22Q49AR2 442 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 E4F1Q66K89 784 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 ACAD10Q6JQN1 1059 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 LRRC31Q6UY01 552 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 MON1BQ7L1V2 547 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 ARCQ7LC44 396 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 DNAAF5Q86Y56 855 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 ALG14Q96F25 216 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 ZNF419Q96HQ0 510 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 FEM1AQ9BSK4 669 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 EDEM2Q9BV94 578 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 MAGEB5Q9BZ81 275 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 TAS2R14Q9NYV8 317 aa13.22□□□□□ -0.29
TRAPPC4-205ENST00000525079 DRGXA6NNA5 263 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 C4orf47A7E2U8 309 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 DNTTP04053 509 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 CALB1P05937 261 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 RHOCP08134 193 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 GPD1P21695 349 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 OXTRP30559 389 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 ACSL1P33121 698 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 OXCT1P55809 520 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 ACCSLQ4AC99 568 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 C9orf64Q5T6V5 341 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 SFMBT2Q5VUG0 894 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 ZNF776Q68DI1 518 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 IL31Q6EBC2 164 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 DNAJC24Q6P3W2 148 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 WDR59Q6PJI9 974 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 TFAP2DQ7Z6R9 452 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 MMAAQ8IVH4 418 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 GANCQ8TET4 914 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 FAM172AQ8WUF8 416 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 C1orf74Q96LT6 269 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 HAPLN3Q96S86 360 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 SYT11Q9BT88 431 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 NUP58Q9BVL2 599 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 MUC3BQ9H195 1237 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 RSPH9Q9H1X1 276 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 HAUS4Q9H6D7 363 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 VPS28Q9UK41 221 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 MYO6Q9UM54 1294 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 TBC1D30Q9Y2I9 924 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 OR51B4Q9Y5P0 310 aa13.21□□□□□ -0.29
TRAPPC4-205ENST00000525079 ITIH6Q6UXX5 1313 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 EDDM13A0A1B0GTR0 161 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 TCRBV5S1A1TA0A578 114 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 MED19A0JLT2 244 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 SIGLEC16A6NMB1 481 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 MEI4A8MW99 385 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 GOLGA6L19H0YKK7 550 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 IGLV3-19P01714 112 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 SKILP12757 684 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 RRM1P23921 792 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 ADRA1BP35368 520 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 NNMTP40261 264 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 PTPN9P43378 593 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 MAPK8P45983 427 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 UBASH3AP57075 661 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 RPL7AP62424 266 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 C1QBPQ07021 282 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 SKOR2Q2VWA4 1001 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 SYCP2LQ5T4T6 812 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 ARTNQ5T4W7 220 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 DCAF12L1Q5VU92 463 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 ERMP1Q7Z2K6 904 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 ZNF571Q7Z3V5 609 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 MCOLN2Q8IZK6 566 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 STK40Q8N2I9 435 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 CCDC185Q8N715 623 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 KDM1BQ8NB78 822 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 C3orf20Q8ND61 904 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 CPLX3Q8WVH0 158 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 PTPRN2Q92932 1015 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 MCEEQ96PE7 176 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 FAM129BQ96TA1 746 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 NUSAP1Q9BXS6 441 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 MIR1-1HGQ9H1L0 117 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 FBRSQ9HAH7 460 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 SLC25A13Q9UJS0 675 aa13.2□□□□□ -0.3
TRAPPC4-205ENST00000525079 ADAMTS9Q9P2N4 1935 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 CEP250Q9BV73 2442 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 IGLV3-10A0A075B6K4 115 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 A0A0D9SEW6 157 aa13.19□□□□□ -0.3
TRAPPC4-205ENST00000525079 TARSL2A2RTX5 802 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms