RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 PPP1R12AO14974 1030 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 CHADO15335 359 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 NCAM2O15394 837 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 PHF2O75151 1096 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 TYRP14679 529 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 MX2P20592 715 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 EIF3EP60228 445 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 GAD2Q05329 585 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 C2orf54Q08AI8 447 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 PDK1Q15118 436 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 CCNG2Q16589 344 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 PARP15Q460N3 678 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 CCDC33Q8N5R6 958 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 ZNF557Q8N988 423 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 C12orf50Q8NA57 414 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 NETO2Q8NC67 525 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 RSAD2Q8WXG1 361 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 MAGOHBQ96A72 148 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 P2RY11Q96G91 374 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 RPP25Q9BUL9 199 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 KLC2Q9H0B6 622 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 RBM12Q9NTZ6 932 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 THEGQ9P2T0 379 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 TBC1D30Q9Y2I9 924 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 DOCK4Q8N1I0 1966 aa16.25■□□□□ 0.19
TSPAN4-213ENST00000524895 SPTBN5Q9NRC6 3674 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 ARHGAP42A6NI28 874 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 RASA4BC9J798 803 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 H7C0C1 242 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 HOXC11O43248 304 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 RASA4O43374 803 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 LIASO43766 372 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 ATP5OP48047 213 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 YBEYP58557 167 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 GNA12Q03113 381 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 TNK2Q07912 1038 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 GALNT2Q10471 571 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 SLC10A2Q12908 348 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 NR1H3Q13133 447 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 SNX1Q13596 522 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 BYSLQ13895 437 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 POLD3Q15054 466 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 CYP1B1Q16678 543 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 AAK1Q2M2I8 961 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 AFMIDQ63HM1 303 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 RNF43Q68DV7 783 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 CXorf57Q6NSI4 855 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 ZNF783Q6ZMS7 281 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 ZC3H18Q86VM9 953 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 ZNF354CQ86Y25 554 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 CDKL3Q8IVW4 592 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 ARHGAP12Q8IWW6 846 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 KLHL7Q8IXQ5 586 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 ATPAF2Q8N5M1 289 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 NXPE3Q969Y0 559 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 OLFM3Q96PB7 478 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 SLC39A8Q9C0K1 460 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 MUC3BQ9H195 1237 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 LRRC19Q9H756 370 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 BRD9Q9H8M2 597 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 ECT2Q9H8V3 914 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 HPS4Q9NQG7 708 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 IGSF9Q9P2J2 1179 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 LIMD1Q9UGP4 676 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 DNPEPQ9ULA0 475 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 C5orf42Q9H799 3197 aa16.24■□□□□ 0.19
TSPAN4-213ENST00000524895 ILVBLA1L0T0 632 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 RBP3P10745 1247 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 CHRNA3P32297 505 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 ETFBP38117 255 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 FNTAP49354 379 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 OXCT1P55809 520 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 XRCC4Q13426 336 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 RUNX3Q13761 415 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 RNF219Q5W0B1 726 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 TP53INP2Q8IXH6 220 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 CCNYQ8ND76 341 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 FIBINQ8TAL6 211 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 SLC35B2Q8TB61 432 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 WFDC5Q8TCV5 224 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 TFB1MQ8WVM0 346 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 NKD2Q969F2 451 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 HMCESQ96FZ2 354 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 CCDC114Q96M63 670 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 QKIQ96PU8 341 aaKnown RBP eCLIP16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 XPO6Q96QU8 1125 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 DDX47Q9H0S4 455 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 MAGEH1Q9H213 219 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 NOL6Q9H6R4 1146 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 KCNK12Q9HB15 430 aa16.23■□□□□ 0.19
TSPAN4-213ENST00000524895 COL4A3Q01955 1670 aa16.22■□□□□ 0.19
TSPAN4-213ENST00000524895 HACD1B0YJ81 288 aa16.22■□□□□ 0.19
TSPAN4-213ENST00000524895 CACNG3O60359 315 aa16.22■□□□□ 0.19
TSPAN4-213ENST00000524895 COILP38432 576 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-213ENST00000524895 CSKP41240 450 aa16.22■□□□□ 0.19
TSPAN4-213ENST00000524895 GARSP41250 739 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-213ENST00000524895 PAPOLAP51003 745 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-213ENST00000524895 AP1B1Q10567 949 aa16.22■□□□□ 0.19
TSPAN4-213ENST00000524895 ITPRIPL2Q3MIP1 535 aa16.22■□□□□ 0.19
TSPAN4-213ENST00000524895 SLC45A4Q5BKX6 768 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms