RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 RAPGEF1Q13905 1077 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 CCNIQ14094 377 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 ZNF267Q14586 743 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-208ENST00000524652 LY6KQ17RY6 165 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 ZNF260Q3ZCT1 412 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 MCMDC2Q4G0Z9 681 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 PLA1AQ53H76 456 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 C10orf25Q5T742 122 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 CST9Q5W186 159 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 DENND2CQ68D51 928 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 CTR9Q6PD62 1173 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 CRELD2Q6UXH1 353 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-208ENST00000524652 DPY19L3Q6ZPD9 716 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 RAB11FIP4Q86YS3 637 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 TEX11Q8IYF3 940 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 SLC44A5Q8NCS7 719 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 OR6B3Q8NGW1 331 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 C16orf52Q8NHV5 167 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-208ENST00000524652 BPIFB1Q8TDL5 484 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 CDCA5Q96FF9 252 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 DYNLL2Q96FJ2 89 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 C17orf80Q9BSJ5 609 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 EFHD1Q9BUP0 239 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.42□□□□□ -1.86
CSDE1-208ENST00000524652 DEFB129Q9H1M3 183 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 HELLSQ9NRZ9 838 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 ASIC5Q9NY37 505 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 SLC4A4Q9Y6R1 1079 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 PLXNB2O15031 1838 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 NEDD4P46934 1319 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 RAD50Q92878 1312 aa3.42□□□□□ -1.86
CSDE1-208ENST00000524652 PLXNA1Q9UIW2 1896 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 ROBO3Q96MS0 1386 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 RBBP6Q7Z6E9 1792 aaKnown RBP3.41□□□□□ -1.86
CSDE1-208ENST00000524652 BTN3A1O00481 513 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 ENTPD3O75355 529 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 PMPCBO75439 489 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 RNF8O76064 485 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 TOMM70O94826 608 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 UBXN7O94888 489 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 VNN1O95497 513 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 BAG3O95817 575 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 MT-CO3P00414 261 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 LDHCP07864 332 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 CYP21A2P08686 494 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 TMEM191BP0C7N4 346 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 NCLP19338 710 aaKnown RBP3.41□□□□□ -1.86
CSDE1-208ENST00000524652 SHMT1P34896 483 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 MMP14P50281 582 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 BCAT1P54687 386 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 HAND2P61296 217 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 GSTO1P78417 241 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 GABPAQ06546 454 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 SLC13A2Q13183 592 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 CTBP1Q13363 440 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 PRKG1Q13976 671 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 MLC1Q15049 377 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 PTPROQ16827 1216 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 C12orf60Q5U649 245 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 FKBP1CQ5VVH2 108 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 ZSCAN25Q6NSZ9 544 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 SHC4Q6S5L8 630 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 STOX1Q6ZVD7 989 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 PTCHD4Q6ZW05 846 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 APOBEC3FQ8IUX4 373 aaKnown RBP3.41□□□□□ -1.86
CSDE1-208ENST00000524652 TBC1D10CQ8IV04 446 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 SPARTQ8N0X7 666 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 LINC01465Q8N7H1 131 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 TMEM171Q8WVE6 324 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 FAM151AQ8WW52 585 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 MAP4K1Q92918 833 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 DCPSQ96C86 337 aaKnown RBP3.41□□□□□ -1.86
CSDE1-208ENST00000524652 CLMNQ96JQ2 1002 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 CCDC17Q96LX7 622 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 RHOBTB2Q9BYZ6 727 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 MS4A7Q9GZW8 240 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-208ENST00000524652 XPNPEP3Q9NQH7 507 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 DIAPH3Q9NSV4 1193 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 TYW1Q9NV66 732 aaKnown RBP3.41□□□□□ -1.86
CSDE1-208ENST00000524652 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.41□□□□□ -1.86
CSDE1-208ENST00000524652 ZMYM6O95789 1325 aa3.41□□□□□ -1.86
CSDE1-208ENST00000524652 WDR81Q562E7 1941 aa3.4□□□□□ -1.86
CSDE1-208ENST00000524652 MYH15Q9Y2K3 1946 aa3.4□□□□□ -1.86
CSDE1-208ENST00000524652 MCM3APO60318 1980 aa3.4□□□□□ -1.86
CSDE1-208ENST00000524652 CASP8AP2Q9UKL3 1982 aa3.4□□□□□ -1.86
CSDE1-208ENST00000524652 LY6G6EA0A0G2JKS1 128 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 HIP1O00291 1037 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 CES2O00748 559 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 PHGDHO43175 533 aaKnown RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 AP1G1O43747 822 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 PRDM1O75626 825 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 CELF2O95319 508 aaKnown RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 SNHG28P0DPA3 235 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 AKR1B1P15121 316 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 EN2P19622 333 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 AGFG1P52594 562 aaKnown RBP3.4□□□□□ -1.87
CSDE1-208ENST00000524652 PSG6Q00889 435 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 GHRHRQ02643 423 aa3.4□□□□□ -1.87
CSDE1-208ENST00000524652 SRSF1Q07955 248 aaKnown RBP eCLIP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms