RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 ZMPSTE24O75844 475 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 LCA5LO95447 670 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 ASLP04424 464 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 HLA-EP13747 358 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 POLR2EP19388 210 aaKnown RBP12.29□□□□□ -0.44
CLN8-207ENST00000524258 NDUFV2P19404 249 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 MIPP30301 263 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 CNR2P34972 360 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 AIF1P55008 147 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 ZNF177Q13360 481 aaPredicted RBP12.29□□□□□ -0.44
CLN8-207ENST00000524258 ACAP1Q15027 740 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 MAP7D1Q3KQU3 841 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 ARL13BQ3SXY8 428 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 DAB2IPQ5VWQ8 1189 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 TXNRD3NBQ6F5E7 133 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 ANO7Q6IWH7 933 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 SETD3Q86TU7 594 aaPredicted RBP12.29□□□□□ -0.44
CLN8-207ENST00000524258 FRS2Q8WU20 508 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 GAB3Q8WWW8 586 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 ATRIPQ8WXE1 791 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 FAM122AQ96E09 287 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 BTBD6Q96KE9 485 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 MRGPRX1Q96LB2 322 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 NUP85Q9BW27 656 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 ZYG11BQ9C0D3 744 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 SLC6A17Q9H1V8 727 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 MTG2Q9H4K7 406 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 RETREG1Q9H6L5 497 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 MRPL47Q9HD33 250 aaKnown RBP12.29□□□□□ -0.44
CLN8-207ENST00000524258 PRSS16Q9NQE7 514 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 TMEM248Q9NWD8 314 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 GPATCH2LQ9NWQ4 482 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 ERVW-1Q9UQF0 538 aa12.29□□□□□ -0.44
CLN8-207ENST00000524258 TCRBV21S2A2A0A5A6 115 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 ILVBLA1L0T0 632 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 WASH4PA8MWX3 477 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 DCLK1O15075 740 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 CD160O95971 181 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 ATP5BP06576 529 aaKnown RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 SRPRAP08240 638 aaKnown RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 TPM1P09493 284 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 TMEM253P0C7T8 217 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 RHOQP17081 205 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 CDC25BP30305 580 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 PCK1P35558 622 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 P2RY2P41231 377 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 NUMBP49757 651 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 STK19P49842 368 aaPredicted RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 OXCT1P55809 520 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 ECT2LQ008S8 904 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 TCEAL1Q15170 157 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 HNRNPA1L2Q32P51 320 aaKnown RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 C9orf64Q5T6V5 341 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 RNF219Q5W0B1 726 aaPredicted RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 SCYL2Q6P3W7 929 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 ZC3H14Q6PJT7 736 aaKnown RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 LRRC31Q6UY01 552 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 TFAP2DQ7Z6R9 452 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 TMEM139Q8IV31 216 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 FRMD1Q8N878 549 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 ZNF366Q8N895 744 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 ERLEC1Q96DZ1 483 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 ZC3H10Q96K80 434 aaKnown RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 PANX2Q96RD6 677 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 SNRNP25Q9BV90 132 aaKnown RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 ACE2Q9BYF1 805 aaPredicted RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 TPSD1Q9BZJ3 242 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 KLC2Q9H0B6 622 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 POLMQ9NP87 494 aaPredicted RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 CD93Q9NPY3 652 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 ZNHIT6Q9NWK9 470 aaKnown RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 MBD1Q9UIS9 605 aaPredicted RBP12.28□□□□□ -0.44
CLN8-207ENST00000524258 ABCA7Q8IZY2 2146 aa12.28□□□□□ -0.44
CLN8-207ENST00000524258 CFAP54Q96N23 3096 aa12.27□□□□□ -0.44
CLN8-207ENST00000524258 CHD5Q8TDI0 1954 aa12.27□□□□□ -0.44
CLN8-207ENST00000524258 TTC34A8MYJ7 566 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 ATP9BO43861 1147 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 AKR1B10O60218 316 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 SNAP91O60641 907 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 MTA2O94776 668 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 MT-CO1P00395 513 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 LMNAP02545 664 aaKnown RBP12.27□□□□□ -0.45
CLN8-207ENST00000524258 H2AFZP0C0S5 128 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 BCKDHBP21953 392 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 TGM1P22735 817 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 GLDCP23378 1020 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 MRE11P49959 708 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 SLC25A11Q02978 314 aaKnown RBP12.27□□□□□ -0.45
CLN8-207ENST00000524258 PIGHQ14442 188 aaPredicted RBP12.27□□□□□ -0.45
CLN8-207ENST00000524258 ERMARDQ5T6L9 678 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 SDE2Q6IQ49 451 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 SERPINA13PQ6UXR4 307 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 ZNF783Q6ZMS7 281 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 H2AFVQ71UI9 128 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 KBTBD6Q86V97 674 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 PSTKQ8IV42 348 aaKnown RBP12.27□□□□□ -0.45
CLN8-207ENST00000524258 OR7D4Q8NG98 312 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 HMGB4Q8WW32 186 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms