RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	ANKRD36	A6QL64	1941 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	TBKBP1	A7MCY6	615 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM72C	H0Y354	149 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	MSI1	O43347	362 aa	Known RBP	11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	SNX3	O60493	162 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	PQBP1	O60828	265 aa	Known RBP	11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	PAGE1	O75459	146 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	DCTN3	O75935	186 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	ANXA9	O76027	345 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	PARN	O95453	639 aa	Known RBP	11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	ASMTL	O95671	621 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	AP2A1	O95782	977 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	GSTA1	P08263	222 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	PYGB	P11216	843 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	ADRA1D	P25100	572 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	DNAJB2	P25686	324 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	YWHAQ	P27348	245 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	MAGEA3	P43357	314 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	TBX4	P57082	545 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM189B	P81408	668 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	ZNF33A	Q06730	810 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	MGAT5	Q09328	741 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	CBLB	Q13191	982 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	DNAJC3	Q13217	504 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	MTA1	Q13330	715 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	MGAT5B	Q3V5L5	792 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM72A	Q5TYM5	149 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	STEAP4	Q687X5	459 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM72D	Q6L9T8	149 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	MARK2	Q7KZI7	788 aa	Known RBP	11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	TRPM8	Q7Z2W7	1104 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	PIGW	Q7Z7B1	504 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	LRRTM3	Q86VH5	581 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM72B	Q86X60	149 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	SPPL2B	Q8TCT7	592 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	TCP10L	Q8TDR4	215 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	C2orf15	Q8WU43	125 aa	Known RBP	11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	SREK1	Q8WXA9	508 aa	Known RBP	11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	LINC01599	Q8WXQ3	324 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	CELF6	Q96J87	481 aa	Known RBP	11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	TSNARE1	Q96NA8	513 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	GUCD1	Q96NT3	240 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	PGLYRP2	Q96PD5	576 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	KLF6	Q99612	283 aa	Predicted RBP	11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	TMEM175	Q9BSA9	504 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	NACA2	Q9H009	215 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	PCMTD2	Q9NV79	361 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	SYBU	Q9NX95	663 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	ARHGEF38	Q9NXL2	777 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	VANGL2	Q9ULK5	521 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	AAR2	Q9Y312	384 aa	Known RBP	11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	SNX10	Q9Y5X0	201 aa		11.02	□□□□□ -0.65
SPIDR-222	ENST00000524006	LTBP2	Q14767	1821 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	WDR91	A4D1P6	747 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM159B	A6NKW6	160 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006		F8W810	466 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	TYROBP	O43914	113 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	FSBP	O95073	299 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	ALDH2	P05091	517 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	NFKB1	P19838	968 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	TAC1	P20366	129 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	NPY2R	P49146	381 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	GEM	P55040	296 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	WDR4	P57081	412 aa	Known RBP	11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	PDE1B	Q01064	536 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	WASHC5	Q12768	1159 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	MBTPS1	Q14703	1052 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	CRYM	Q14894	314 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	C10orf120	Q5SQS8	335 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	SPOUT1	Q5T280	376 aa	Known RBP	11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	ATG16L1	Q676U5	607 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	MSANTD2	Q6P1R3	559 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	FUT10	Q6P4F1	479 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	CD300LG	Q6UXG3	332 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	RGS9BP	Q6ZS82	235 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	ANKS3	Q6ZW76	656 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	ZNF534	Q76KX8	674 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	BHLHA9	Q7RTU4	235 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	MPP5	Q8N3R9	675 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	NPW	Q8N729	165 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	BANP	Q8N9N5	519 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	NETO2	Q8NC67	525 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	PPHLN1	Q8NEY8	458 aa	Known RBP	11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	TET1	Q8NFU7	2136 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	USP33	Q8TEY7	942 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	CASP10	Q92851	521 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	FCRL2	Q96LA5	508 aa	Predicted RBP	11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	SIGLEC10	Q96LC7	697 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	FSD1L	Q9BXM9	530 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	SP110	Q9HB58	689 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	COMMD8	Q9NX08	183 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	NSMCE4A	Q9NXX6	385 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	GMIP	Q9P107	970 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	FNIP2	Q9P278	1114 aa		11.01	□□□□□ -0.65
SPIDR-222	ENST00000524006	DNAJB4	Q9UDY4	337 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms