RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CD248Q9HCU0 757 aa12.91□□□□□ -0.34
VEGFA-225ENST00000523950 ZDHHC4Q9NPG8 344 aa12.91□□□□□ -0.34
VEGFA-225ENST00000523950 TMPRSS4Q9NRS4 437 aa12.91□□□□□ -0.34
VEGFA-225ENST00000523950 IMPACTQ9P2X3 320 aa12.91□□□□□ -0.34
VEGFA-225ENST00000523950 SUN2Q9UH99 717 aa12.91□□□□□ -0.34
VEGFA-225ENST00000523950 ANAPC7Q9UJX3 599 aa12.91□□□□□ -0.34
VEGFA-225ENST00000523950 INTUQ9ULD6 942 aa12.91□□□□□ -0.34
VEGFA-225ENST00000523950 SNX10Q9Y5X0 201 aa12.91□□□□□ -0.34
VEGFA-225ENST00000523950 CACNA1HO95180 2353 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 CXorf51AA0A1B0GTR3 108 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 ILVBLA1L0T0 632 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 MYO1FO00160 1098 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 PRPSAP2O60256 369 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 LRCH4O75427 683 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 CNTN5O94779 1100 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 LRIG2O94898 1065 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 C7P10643 843 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 FECHP22830 423 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 OR1E1P30953 314 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 HOXC13P31276 330 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 ETFBP38117 255 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 WASP42768 502 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 KRT83P78385 493 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 ECT2LQ008S8 904 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 FNDC3BQ53EP0 1204 aaKnown RBP12.9□□□□□ -0.34
VEGFA-225ENST00000523950 USP39Q53GS9 565 aaKnown RBP12.9□□□□□ -0.34
VEGFA-225ENST00000523950 ARTNQ5T4W7 220 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 ERMARDQ5T6L9 678 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 APCDD1Q8J025 514 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 ZNF564Q8TBZ8 553 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-225ENST00000523950 CYB5D2Q8WUJ1 264 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 SORCS1Q8WY21 1168 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 ARHGEF26Q96DR7 871 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 ALG14Q96F25 216 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 FEM1AQ9BSK4 669 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 C2orf49Q9BVC5 232 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-225ENST00000523950 CATSPERBQ9H7T0 1116 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 LUC7LQ9NQ29 371 aaKnown RBP12.9□□□□□ -0.34
VEGFA-225ENST00000523950 POLR3BQ9NW08 1133 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-225ENST00000523950 TMEM248Q9NWD8 314 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 BCCIPQ9P287 314 aaKnown RBP eCLIP12.9□□□□□ -0.34
VEGFA-225ENST00000523950 ZNF212Q9UDV6 495 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 SLC25A13Q9UJS0 675 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 AP4E1Q9UPM8 1137 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 ERVW-1Q9UQF0 538 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 OR51B4Q9Y5P0 310 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 CHD5Q8TDI0 1954 aa12.9□□□□□ -0.34
VEGFA-225ENST00000523950 NYNRINQ9P2P1 1898 aaKnown RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 TARSL2A2RTX5 802 aaKnown RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 WASH4PA8MWX3 477 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 GOLGA6L6A8MZA4 724 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 FGF10O15520 208 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 ZNF217O75362 1048 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 RPP40O75818 363 aaKnown RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 LMNAP02545 664 aaKnown RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 EPHX1P07099 455 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 GABRG2P18507 467 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 PRKCHP24723 683 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 MZF1P28698 734 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 MIPP30301 263 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 CYLC1P35663 651 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 SEMA3BQ13214 749 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 CAMK2GQ13555 558 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 BOLA3Q53S33 107 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 RWDD4Q6NW29 188 aaKnown RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 METTL3Q86U44 580 aaKnown RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 NLRP14Q86W24 1093 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 TMTC1Q8IUR5 882 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 RHOT2Q8IXI1 618 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 ARFGAP1Q8N6T3 406 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 DCAF4L2Q8NA75 395 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 OR2T3Q8NH03 318 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 HMGB4Q8WW32 186 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 MYO19Q96H55 970 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 SPACA7Q96KW9 195 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 MRGPRX3Q96LB0 322 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 SNRNP25Q9BV90 132 aaKnown RBP12.89□□□□□ -0.35
VEGFA-225ENST00000523950 TRIM7Q9C029 511 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 MUC3BQ9H195 1237 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 GRPEL1Q9HAV7 217 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 SPTLC3Q9NUV7 552 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 MPP6Q9NZW5 540 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 CTTNBP2NLQ9P2B4 639 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 VPS28Q9UK41 221 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 RAB23Q9ULC3 237 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 USP18Q9UMW8 372 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 NEU3Q9UQ49 428 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 RAD54BQ9Y620 910 aa12.89□□□□□ -0.35
VEGFA-225ENST00000523950 WASH3PC4AMC7 463 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 FAM72CH0Y354 149 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 HRO43593 1189 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 MTA2O94776 668 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 LCA5LO95447 670 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 EPHB2P29323 1055 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 MAN1A1P33908 653 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 PXNP49023 591 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-225ENST00000523950 CLCN6P51797 869 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 ZBTB16Q05516 673 aa12.88□□□□□ -0.35
VEGFA-225ENST00000523950 SIM2Q14190 667 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-225ENST00000523950 TCEAL1Q15170 157 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms