RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 C1SP09871 688 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 FMO5P49326 533 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 C19orf57Q0VDD7 668 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 ZC3H12AQ5D1E8 599 aaKnown RBP26.79■■□□□ 1.88
PVT1-219ENST00000523427 RRAGAQ7L523 313 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 TAC4Q86UU9 113 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 KDM1BQ8NB78 822 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 SLC39A7Q92504 469 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 ERCC4Q92889 916 aaPredicted RBP26.79■■□□□ 1.88
PVT1-219ENST00000523427 CCDC34Q96HJ3 373 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 RMND1Q9NWS8 449 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 TJP2Q9UDY2 1190 aa26.79■■□□□ 1.88
PVT1-219ENST00000523427 HELZ2Q9BYK8 2649 aaKnown RBP26.78■■□□□ 1.88
PVT1-219ENST00000523427 CAPN9O14815 690 aa26.78■■□□□ 1.88
PVT1-219ENST00000523427 RRP8O43159 456 aaKnown RBP26.78■■□□□ 1.88
PVT1-219ENST00000523427 SDC3O75056 442 aa26.78■■□□□ 1.88
PVT1-219ENST00000523427 APOEP02649 317 aa26.78■■□□□ 1.88
PVT1-219ENST00000523427 MZF1P28698 734 aaPredicted RBP26.78■■□□□ 1.88
PVT1-219ENST00000523427 NNMTP40261 264 aa26.78■■□□□ 1.88
PVT1-219ENST00000523427 METAP1P53582 386 aa26.78■■□□□ 1.88
PVT1-219ENST00000523427 ARID5BQ14865 1188 aa26.78■■□□□ 1.88
PVT1-219ENST00000523427 POM121L1PQ3SYA9 428 aa26.78■■□□□ 1.88
PVT1-219ENST00000523427 SYPL2Q5VXT5 272 aa26.78■■□□□ 1.88
PVT1-219ENST00000523427 PRPF39Q86UA1 669 aaKnown RBP26.78■■□□□ 1.88
PVT1-219ENST00000523427 SLC39A13Q96H72 371 aa26.78■■□□□ 1.88
PVT1-219ENST00000523427 SHROOM3Q8TF72 1996 aa26.78■■□□□ 1.88
PVT1-219ENST00000523427 SETXQ7Z333 2677 aaKnown RBP26.78■■□□□ 1.88
PVT1-219ENST00000523427 RTN2O75298 545 aa26.77■■□□□ 1.88
PVT1-219ENST00000523427 CDK4P11802 303 aa26.77■■□□□ 1.88
PVT1-219ENST00000523427 PDGFRAP16234 1089 aa26.77■■□□□ 1.88
PVT1-219ENST00000523427 TACR2P21452 398 aa26.77■■□□□ 1.88
PVT1-219ENST00000523427 ZNF658Q5TYW1 1059 aaPredicted RBP26.77■■□□□ 1.88
PVT1-219ENST00000523427 FBXL19Q6PCT2 694 aa26.77■■□□□ 1.88
PVT1-219ENST00000523427 CIR1Q86X95 450 aaPredicted RBP26.77■■□□□ 1.88
PVT1-219ENST00000523427 SPATS2Q86XZ4 545 aaKnown RBP26.77■■□□□ 1.88
PVT1-219ENST00000523427 TSC1Q92574 1164 aa26.77■■□□□ 1.88
PVT1-219ENST00000523427 SCAND2PQ9GZW5 306 aaPredicted RBP26.77■■□□□ 1.88
PVT1-219ENST00000523427 ITIH6Q6UXX5 1313 aa26.76■■□□□ 1.87
PVT1-219ENST00000523427 STILQ15468 1287 aa26.76■■□□□ 1.87
PVT1-219ENST00000523427 ACCSLQ4AC99 568 aa26.76■■□□□ 1.87
PVT1-219ENST00000523427 NAPEPLDQ6IQ20 393 aa26.76■■□□□ 1.87
PVT1-219ENST00000523427 COL5A1P20908 1838 aaPredicted RBP26.76■■□□□ 1.87
PVT1-219ENST00000523427 DRD3P35462 400 aa26.75■■□□□ 1.87
PVT1-219ENST00000523427 ELAVL3Q14576 367 aaKnown RBP26.75■■□□□ 1.87
PVT1-219ENST00000523427 CCDC40Q4G0X9 1142 aa26.75■■□□□ 1.87
PVT1-219ENST00000523427 MFSD2AQ8NA29 543 aa26.75■■□□□ 1.87
PVT1-219ENST00000523427 FCRL3Q96P31 734 aaPredicted RBP26.75■■□□□ 1.87
PVT1-219ENST00000523427 PRORYQ9H606 182 aa26.75■■□□□ 1.87
PVT1-219ENST00000523427 CA5BQ9Y2D0 317 aa26.75■■□□□ 1.87
PVT1-219ENST00000523427 FLNBO75369 2602 aaKnown RBP26.75■■□□□ 1.87
PVT1-219ENST00000523427 F5H5T6 163 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 BNIP3LO60238 219 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 CKMT2P17540 419 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 RXRGP48443 463 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 ISM2Q6H9L7 571 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 DENND1BQ6P3S1 775 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 ARHGEF19Q8IW93 802 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 OXR1Q8N573 874 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 BAP1Q92560 729 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 NRSN2Q9GZP1 204 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 ERVMER34-1Q9H9K5 563 aa26.74■■□□□ 1.87
PVT1-219ENST00000523427 SYNJ2BP-COX16A0A087WUM0 186 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 BRINP1O60477 761 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 KRT5P13647 590 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 GLDCP23378 1020 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 CCDC173Q0VFZ6 552 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 NNTQ13423 1086 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 STAT4Q14765 748 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 RTP5Q14D33 572 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 CCAR2Q8N163 923 aaKnown RBP26.73■■□□□ 1.87
PVT1-219ENST00000523427 MYOCQ99972 504 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 METTL14Q9HCE5 456 aaKnown RBP26.73■■□□□ 1.87
PVT1-219ENST00000523427 COX16Q9P0S2 106 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 ARHGAP20Q9P2F6 1191 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 CYTH4Q9UIA0 394 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 SARDHQ9UL12 918 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 CLCA2Q9UQC9 943 aa26.73■■□□□ 1.87
PVT1-219ENST00000523427 PTPRQQ9UMZ3 2332 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 C10orf142B7Z368 130 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 SART1O43290 800 aaKnown RBP26.72■■□□□ 1.87
PVT1-219ENST00000523427 LATO43561 262 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 TRUB2O95900 331 aaKnown RBP26.72■■□□□ 1.87
PVT1-219ENST00000523427 ZNF18P17022 549 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 GPD2P43304 727 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 PITX1P78337 314 aaPredicted RBP26.72■■□□□ 1.87
PVT1-219ENST00000523427 LRRC63Q05C16 580 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 SFMBT2Q5VUG0 894 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 KDM7AQ6ZMT4 941 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 OR8D1Q8WZ84 308 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 BTN2A3PQ96KV6 586 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 SPAG5Q96R06 1193 aa26.72■■□□□ 1.87
PVT1-219ENST00000523427 ATXN7O15265 892 aaPredicted RBP26.71■■□□□ 1.87
PVT1-219ENST00000523427 C1QL1O75973 258 aa26.71■■□□□ 1.87
PVT1-219ENST00000523427 SMC2O95347 1197 aa26.71■■□□□ 1.87
PVT1-219ENST00000523427 CETN1Q12798 172 aa26.71■■□□□ 1.87
PVT1-219ENST00000523427 CNTN1Q12860 1018 aa26.71■■□□□ 1.87
PVT1-219ENST00000523427 KANSL1Q7Z3B3 1105 aa26.71■■□□□ 1.87
PVT1-219ENST00000523427 ATP6V0D2Q8N8Y2 350 aa26.71■■□□□ 1.87
PVT1-219ENST00000523427 KLK6Q92876 244 aa26.71■■□□□ 1.87
PVT1-219ENST00000523427 FGF11Q92914 225 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms