RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 SLC46A2Q9BY10 475 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 FUT8Q9BYC5 575 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 PRKD2Q9BZL6 878 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 SLC39A8Q9C0K1 460 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 SMG9Q9H0W8 520 aaKnown RBP6.9□□□□□ -1.3
PVT1-217ENST00000523190 ADAM7Q9H2U9 754 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 DNAJC17Q9NVM6 304 aaKnown RBP6.9□□□□□ -1.3
PVT1-217ENST00000523190 TMEM248Q9NWD8 314 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 ZDHHC7Q9NXF8 308 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 PAK5Q9P286 719 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 PPARGC1AQ9UBK2 798 aaKnown RBP6.9□□□□□ -1.3
PVT1-217ENST00000523190 MTRF1LQ9UGC7 380 aaKnown RBP6.9□□□□□ -1.3
PVT1-217ENST00000523190 ANAPC5Q9UJX4 755 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 AGO1Q9UL18 857 aaKnown RBP6.9□□□□□ -1.3
PVT1-217ENST00000523190 TPX2Q9ULW0 747 aaKnown RBP6.9□□□□□ -1.3
PVT1-217ENST00000523190 SH3BP1Q9Y3L3 701 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 RAD54BQ9Y620 910 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 ZFP37Q9Y6Q3 630 aaPredicted RBP6.9□□□□□ -1.3
PVT1-217ENST00000523190 CLUHO75153 1309 aa6.9□□□□□ -1.3
PVT1-217ENST00000523190 MTCL1Q9Y4B5 1905 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 A0A0A0MRY4 1105 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 TCRBV7S3A2A0A539 114 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 C5orf60A6NFR6 353 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 F5H423 210 aaPredicted RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 KCNK1O00180 336 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 LEFTY2O00292 366 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 NCAM2O15394 837 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 GREM1O60565 184 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 GCATO75600 419 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 STK10O94804 968 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 TMEM63AO94886 807 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 FGF19O95750 216 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 LATS1O95835 1130 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 POU2F2P09086 479 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 CEBPBP17676 345 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 MX2P20592 715 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 PTPN3P26045 913 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 HSPA9P38646 679 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 PAPOLAP51003 745 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 RPS24P62847 133 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 CAV1Q03135 178 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 GAD2Q05329 585 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 DHX9Q08211 1270 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 WASHC5Q12768 1159 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 ZBTB17Q13105 803 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 CASP8Q14790 479 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 C5orf22Q49AR2 442 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 ARHGAP15Q53QZ3 475 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 RABGAP1LQ5R372 815 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 ANKRD20A2Q5SQ80 823 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 RARS2Q5T160 578 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 SYCP2LQ5T4T6 812 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 ACBD5Q5T8D3 534 aaPredicted RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 RNASEH2BQ5TBB1 312 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 ANKRD20A1Q5TYW2 823 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 ANKRD20A3Q5VUR7 823 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 ANKRD22Q5VYY1 191 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 AFMIDQ63HM1 303 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 ELMSAN1Q6PJG2 1045 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 TMC5Q6UXY8 1006 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 Q6ZNB5 142 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 ARHGEF18Q6ZSZ5 1173 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 HDXQ7Z353 690 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 TMC3Q7Z5M5 1100 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 CCDC25Q86WR0 208 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 CCDC13Q8IYE1 715 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 USP33Q8TEY7 942 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.89□□□□□ -1.31
PVT1-217ENST00000523190 CPT1BQ92523 772 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 PRCCQ92733 491 aaPredicted RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 AZIN2Q96A70 460 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 ZBTB9Q96C00 473 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 MRPL38Q96DV4 380 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 HMCESQ96FZ2 354 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 P2RY11Q96G91 374 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 SPATA13Q96N96 652 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 DDX50Q9BQ39 737 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 APOL5Q9BWW9 433 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 FAM129AQ9BZQ8 928 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 IGFLR1Q9H665 355 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 TASP1Q9H6P5 420 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 NOL6Q9H6R4 1146 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 PIDD1Q9HB75 910 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 RAB6BQ9NRW1 208 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 CFAP97Q9P2B7 532 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 KLHL8Q9P2G9 620 aaPredicted RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 ZNF212Q9UDV6 495 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 DPP7Q9UHL4 492 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 LSM7Q9UK45 103 aaKnown RBP6.89□□□□□ -1.31
PVT1-217ENST00000523190 HPCAL4Q9UM19 191 aa6.89□□□□□ -1.31
PVT1-217ENST00000523190 DENND4CQ5VZ89 1909 aa6.88□□□□□ -1.31
PVT1-217ENST00000523190 NYNRINQ9P2P1 1898 aaKnown RBP6.88□□□□□ -1.31
PVT1-217ENST00000523190 ARHGAP42A6NI28 874 aa6.88□□□□□ -1.31
PVT1-217ENST00000523190 RASA4BC9J798 803 aa6.88□□□□□ -1.31
PVT1-217ENST00000523190 GOLGA8MH3BSY2 632 aa6.88□□□□□ -1.31
PVT1-217ENST00000523190 MAP2K7O14733 419 aa6.88□□□□□ -1.31
PVT1-217ENST00000523190 NDC80O14777 642 aa6.88□□□□□ -1.31
PVT1-217ENST00000523190 LINC01565O15544 149 aa6.88□□□□□ -1.31
PVT1-217ENST00000523190 RASA4O43374 803 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms