RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 MPP6Q9NZW5 540 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 CD207Q9UJ71 328 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 CDH22Q9UJ99 828 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 DRG1Q9Y295 367 aaKnown RBP13.42□□□□□ -0.26
CPNE3-205ENST00000522240 MFHAS1Q9Y4C4 1052 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 HEY1Q9Y5J3 304 aa13.42□□□□□ -0.26
CPNE3-205ENST00000522240 CTIFO43310 598 aaKnown RBP13.41□□□□□ -0.26
CPNE3-205ENST00000522240 RAD51CO43502 376 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 ECEL1O95672 775 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 GAS8O95995 478 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 IRAK1P51617 712 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 TERF1P54274 439 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 DR1Q01658 176 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 ZNF33AQ06730 810 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 SLC10A2Q12908 348 aaPredicted RBP13.41□□□□□ -0.26
CPNE3-205ENST00000522240 CBX2Q14781 532 aaPredicted RBP13.41□□□□□ -0.26
CPNE3-205ENST00000522240 SLC45A4Q5BKX6 768 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 FAM78AQ5JUQ0 283 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 ARHGAP12Q8IWW6 846 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 CCDC105Q8IYK2 499 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 MICALL1Q8N3F8 863 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 SUSD6Q92537 303 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 E2F7Q96AV8 911 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 MYEOVQ96EZ4 313 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 SAE1Q9UBE0 346 aaPredicted RBP13.41□□□□□ -0.26
CPNE3-205ENST00000522240 AMACRQ9UHK6 382 aa13.41□□□□□ -0.26
CPNE3-205ENST00000522240 DOCK8Q8NF50 2099 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 TARSL2A2RTX5 802 aaKnown RBP13.4□□□□□ -0.26
CPNE3-205ENST00000522240 H7C0C1 242 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 MAP3K7O43318 606 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 CNTN5O94779 1100 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 COL9A1P20849 921 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 FCARP24071 287 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 PTGIRP43119 386 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 ATP5OP48047 213 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 SGSHP51688 502 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 YBEYP58557 167 aaPredicted RBP13.4□□□□□ -0.26
CPNE3-205ENST00000522240 RPS24P62847 133 aaKnown RBP13.4□□□□□ -0.26
CPNE3-205ENST00000522240 SNX1Q13596 522 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 PRKD1Q15139 912 aaPredicted RBP13.4□□□□□ -0.26
CPNE3-205ENST00000522240 PARP15Q460N3 678 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 MPPE1Q53F39 396 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 ZNF783Q6ZMS7 281 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 EP400NLQ6ZTU2 488 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 TFAP2DQ7Z6R9 452 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 SETD3Q86TU7 594 aaPredicted RBP13.4□□□□□ -0.26
CPNE3-205ENST00000522240 CIR1Q86X95 450 aaPredicted RBP13.4□□□□□ -0.26
CPNE3-205ENST00000522240 JAMLQ86YT9 394 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 ALLCQ8N6M5 410 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 TDRD5Q8NAT2 981 aaKnown RBP13.4□□□□□ -0.26
CPNE3-205ENST00000522240 CCHCR1Q8TD31 782 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 BPIFB1Q8TDL5 484 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 TFB1MQ8WVM0 346 aaKnown RBP13.4□□□□□ -0.26
CPNE3-205ENST00000522240 PPM1EQ8WY54 764 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 RTP4Q96DX8 246 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 CCDC114Q96M63 670 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 MYADMQ96S97 322 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 FAM118BQ9BPY3 351 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 RAB17Q9H0T7 212 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 POMKQ9H5K3 350 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 ZNF148Q9UQR1 794 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 PCDHGA4Q9Y5G9 962 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 XIRP2A4UGR9 3374 aa13.4□□□□□ -0.26
CPNE3-205ENST00000522240 CHD5Q8TDI0 1954 aa13.4□□□□□ -0.27
CPNE3-205ENST00000522240 ARHGAP42A6NI28 874 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 TTI1O43156 1089 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 MTSS1O43312 755 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 RAMP2O60895 175 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 TBL1XO60907 577 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 CYBBP04839 570 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 OR1E1P30953 314 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 STIP1P31948 543 aaKnown RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 ETFBP38117 255 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 GARSP41250 739 aaKnown RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 KCNJ1P48048 391 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 PPIDQ08752 370 aaKnown RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 SMAD4Q13485 552 aaKnown RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 PTK6Q13882 451 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 AAK1Q2M2I8 961 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 C6orf118Q5T5N4 469 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 DARS2Q6PI48 645 aaKnown RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 ZC3H18Q86VM9 953 aaKnown RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 PARP9Q8IXQ6 854 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 ATPAF2Q8N5M1 289 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 ZNF557Q8N988 423 aaPredicted RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 OSCP1Q8WVF1 389 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 FATE1Q969F0 183 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 TMA16Q96EY4 203 aaKnown RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 TSGA13Q96PP4 275 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 UHRF1Q96T88 793 aaPredicted RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 FERMT1Q9BQL6 677 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 LRRC1Q9BTT6 524 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 MAGEH1Q9H213 219 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 NOL6Q9H6R4 1146 aaKnown RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 UBE2ZQ9H832 354 aaPredicted RBP13.39□□□□□ -0.27
CPNE3-205ENST00000522240 PCDH9Q9HC56 1237 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 NDFIP2Q9NV92 336 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 MARK1Q9P0L2 795 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 TBC1D30Q9Y2I9 924 aa13.39□□□□□ -0.27
CPNE3-205ENST00000522240 NEU2Q9Y3R4 380 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms