RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GPAMQ9HCL2 828 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 OR12D3Q9UGF7 316 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 GJB1P08034 283 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 MSH3P20585 1137 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 RRP1BQ14684 758 aaKnown RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 KCNT2Q6UVM3 1135 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 LRRC49Q8IUZ0 686 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 CORO1CQ9ULV4 474 aaPredicted RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 EIF3LQ9Y262 564 aaKnown RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 RNF103O00237 685 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 B4GALT4O60513 344 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 PYGMP11217 842 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 HOXB8P17481 243 aaPredicted RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 SERPINA4P29622 427 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 TTKP33981 857 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 TTPALQ9BTX7 342 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 RNPEPL1Q9HAU8 725 aa16.5■□□□□ 0.23
USP42-207ENST00000521713 RUVBL2Q9Y230 463 aaKnown RBP16.5■□□□□ 0.23
USP42-207ENST00000521713 ERI2A8K979 691 aaKnown RBP16.49■□□□□ 0.23
USP42-207ENST00000521713 F8VP50 259 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 MMP13P45452 471 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 PRKCQQ04759 706 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 FNDC3BQ53EP0 1204 aaKnown RBP16.49■□□□□ 0.23
USP42-207ENST00000521713 ARMC12Q5T9G4 340 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 RFWD2Q8NHY2 731 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 TMEM120AQ9BXJ8 343 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 GDF3Q9NR23 364 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 TBC1D3BA6NDS4 549 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 ERBB2P04626 1255 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 ALOX15P16050 662 aaPredicted RBP16.49■□□□□ 0.23
USP42-207ENST00000521713 CD151P48509 253 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 HPCAP84074 193 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 TJAP1Q5JTD0 557 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 CACHD1Q5VU97 1274 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 BBS7Q8IWZ6 715 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 C4orf32Q8N8J7 132 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 CORO1BQ9BR76 489 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 WDR41Q9HAD4 459 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 LMO7Q8WWI1 1683 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 KPNA3O00505 521 aaPredicted RBP16.49■□□□□ 0.23
USP42-207ENST00000521713 DNALI1O14645 258 aaPredicted RBP16.49■□□□□ 0.23
USP42-207ENST00000521713 GLI1P08151 1106 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 ATP4AP20648 1035 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 PEX5P50542 639 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 TP53BP2Q13625 1128 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 POU6F1Q14863 301 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 TMC5Q6UXY8 1006 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 METTL3Q86U44 580 aaKnown RBP16.49■□□□□ 0.23
USP42-207ENST00000521713 PAFAH2Q99487 392 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 COMMD3-BMI1R4GMX3 469 aa16.49■□□□□ 0.23
USP42-207ENST00000521713 KCNK1O00180 336 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 SKAP2O75563 359 aaPredicted RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 MAPK1P28482 360 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 GSTA3Q16772 222 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 ARMCX4Q5H9R4 360 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 CLEC4DQ8WXI8 215 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 PPP1R16AQ96I34 528 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 NFKBIZQ9BYH8 718 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 NXF3Q9H4D5 531 aaKnown RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.48■□□□□ 0.23
USP42-207ENST00000521713 MARSP56192 900 aaKnown RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 OVGP1Q12889 678 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 TSHZ1Q6ZSZ6 1077 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 CCDC80Q76M96 950 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 LRRC8DQ7L1W4 858 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 FAM162AQ96A26 154 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 OXCT2Q9BYC2 517 aaPredicted RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 OSGEPL1Q9H4B0 414 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 NUDT5Q9UKK9 219 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 MAFBQ9Y5Q3 323 aaPredicted RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 TGFB1I1O43294 461 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 KDELR1P24390 212 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 ZNF844Q08AG5 666 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 KAT2BQ92831 832 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 COPS7BQ9H9Q2 264 aaPredicted RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 PADI3Q9ULW8 664 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 SLC45A1Q9Y2W3 748 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 CASZ1Q86V15 1759 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 SHPRHQ149N8 1683 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 SOWAHBA6NEL2 793 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 ZSCAN9O15535 394 aaPredicted RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 WBP4O75554 376 aaKnown RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 BCL10O95999 233 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 TCN1P20061 433 aaPredicted RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 PPIGQ13427 754 aaKnown RBP eCLIP16.48■□□□□ 0.23
USP42-207ENST00000521713 ZC3H12AQ5D1E8 599 aaKnown RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 B3GNT6Q6ZMB0 384 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 TMC3Q7Z5M5 1100 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 PTAR1Q7Z6K3 402 aaPredicted RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 DNAAF5Q86Y56 855 aa16.48■□□□□ 0.23
USP42-207ENST00000521713 EXOSC4Q9NPD3 245 aaKnown RBP16.48■□□□□ 0.23
USP42-207ENST00000521713 CXCL14O95715 111 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 LRRC74AQ0VAA2 488 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 ARSHQ5FYA8 562 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 PHF13Q86YI8 300 aaPredicted RBP16.47■□□□□ 0.23
USP42-207ENST00000521713 DHX33Q9H6R0 707 aaKnown RBP16.47■□□□□ 0.23
USP42-207ENST00000521713 FAM50BQ9Y247 325 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 SMIM31A0A1B0GVY4 71 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 TREHO43280 583 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 DDHD2O94830 711 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms