RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 RCOR3Q9P2K3 495 aaPredicted RBP15.76■□□□□ 0.11
LSM1-203ENST00000520755 DRGXA6NNA5 263 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 H3BRJ5 948 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 KIF2AO00139 706 aaPredicted RBP15.75■□□□□ 0.11
LSM1-203ENST00000520755 DCLK1O15075 740 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 ZNF185O15231 689 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 ZRANB2O95218 330 aaKnown RBP eCLIP15.75■□□□□ 0.11
LSM1-203ENST00000520755 KAT7O95251 611 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 EGFP01133 1207 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 APODP05090 189 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 KRT10P13645 584 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 AMPD1P23109 780 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 CASQ1P31415 396 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 MESP2Q0VG99 397 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 ANKRD20A8PQ5CZ79 823 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 TMEM196Q5HYL7 178 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 MPP7Q5T2T1 576 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 ACBD5Q5T8D3 534 aaPredicted RBP15.75■□□□□ 0.11
LSM1-203ENST00000520755 TTC39BQ5VTQ0 682 aaPredicted RBP15.75■□□□□ 0.11
LSM1-203ENST00000520755 FSTL4Q6MZW2 842 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 CCDC50Q8IVM0 306 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 MFN1Q8IWA4 741 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 CCDC117Q8IWD4 279 aaPredicted RBP15.75■□□□□ 0.11
LSM1-203ENST00000520755 PJA1Q8NG27 643 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 NELL2Q99435 816 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 PPARGC1AQ9UBK2 798 aaKnown RBP15.75■□□□□ 0.11
LSM1-203ENST00000520755 F5P12259 2224 aa15.75■□□□□ 0.11
LSM1-203ENST00000520755 A0A1B0GVM2 712 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 TCRBV7S2A1N4TA0A589 114 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 TCAF2A6NFQ2 919 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 H0Y626 953 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 LUC7L3O95232 432 aaKnown RBP15.74■□□□□ 0.11
LSM1-203ENST00000520755 DRD1P21728 446 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 EPHB2P29323 1055 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 HTR7P34969 479 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 ARL4AP40617 200 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 HCAR3P49019 387 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 ZNF135P52742 658 aaPredicted RBP15.74■□□□□ 0.11
LSM1-203ENST00000520755 COPS2P61201 443 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 CDH18Q13634 790 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 PREPLQ4J6C6 727 aaPredicted RBP15.74■□□□□ 0.11
LSM1-203ENST00000520755 TFDP3Q5H9I0 405 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 NCBP2-AS2Q69YL0 99 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 ASTLQ6HA08 431 aaPredicted RBP15.74■□□□□ 0.11
LSM1-203ENST00000520755 RWDD4Q6NW29 188 aaKnown RBP15.74■□□□□ 0.11
LSM1-203ENST00000520755 SFTPA1Q8IWL2 248 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 CCDC105Q8IYK2 499 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 PHTF2Q8N3S3 785 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 NPWQ8N729 165 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 PLD5Q8N7P1 536 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 WFDC5Q8TCV5 224 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 RNF157Q96PX1 679 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 SLC2A11Q9BYW1 496 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 OSBPL8Q9BZF1 889 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 KLC2Q9H0B6 622 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 LMAN1LQ9HAT1 526 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 C11orf16Q9NQ32 467 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 RBM12Q9NTZ6 932 aaKnown RBP15.74■□□□□ 0.11
LSM1-203ENST00000520755 NDFIP2Q9NV92 336 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 SMARCAL1Q9NZC9 954 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 SIT1Q9Y3P8 196 aa15.74■□□□□ 0.11
LSM1-203ENST00000520755 TBC1D3BA6NDS4 549 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 WASH4PA8MWX3 477 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 CES2O00748 559 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 TUBB4AP04350 444 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 DCNP07585 359 aaKnown RBP15.73■□□□□ 0.11
LSM1-203ENST00000520755 CISD3P0C7P0 127 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 PRLRP16471 622 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 RHOQP17081 205 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 TCP1P17987 556 aaKnown RBP15.73■□□□□ 0.11
LSM1-203ENST00000520755 ERCC2P18074 760 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 GRIA2P42262 883 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 KLF1Q13351 362 aaPredicted RBP15.73■□□□□ 0.11
LSM1-203ENST00000520755 LRRC32Q14392 662 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 SEL1L2Q5TEA6 688 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 SLC9A4Q6AI14 798 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 TFAP2DQ7Z6R9 452 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 MAP7D3Q8IWC1 876 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 SUGP1Q8IWZ8 645 aaKnown RBP15.73■□□□□ 0.11
LSM1-203ENST00000520755 ZNF687Q8N1G0 1237 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 RASGEF1CQ8N431 466 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 TERB1Q8NA31 727 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 OR52K2Q8NGK3 314 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 EZH1Q92800 747 aaPredicted RBP15.73■□□□□ 0.11
LSM1-203ENST00000520755 MS4A14Q96JA4 679 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 HEMGNQ9BXL5 484 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 ZYG11BQ9C0D3 744 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 NOL6Q9H6R4 1146 aaKnown RBP15.73■□□□□ 0.11
LSM1-203ENST00000520755 ABCB8Q9NUT2 735 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 TMEM248Q9NWD8 314 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 FBXO10Q9UK96 956 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 SAR1BQ9Y6B6 198 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 KMT2EQ8IZD2 1858 aa15.73■□□□□ 0.11
LSM1-203ENST00000520755 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.72■□□□□ 0.11
LSM1-203ENST00000520755 NCAM2O15394 837 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 FGF10O15520 208 aaPredicted RBP15.72■□□□□ 0.11
LSM1-203ENST00000520755 PI15O43692 258 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 MFSD11O43934 449 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 CEP104O60308 925 aa15.72■□□□□ 0.11
LSM1-203ENST00000520755 CHRNB1P11230 501 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms