RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 TATDN2Q93075 761 aa12.33□□□□□ -0.43
ERGIC1-208ENST00000520399 FICDQ9BVA6 458 aa12.33□□□□□ -0.43
ERGIC1-208ENST00000520399 KCNQ5Q9NR82 932 aa12.33□□□□□ -0.43
ERGIC1-208ENST00000520399 CCDC162PA2VCL2 907 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 TRIM64A6NGJ6 449 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 TRIM64BA6NI03 449 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 TFRCP02786 760 aaKnown RBP12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 CYP2F1P24903 491 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 ST3GAL1Q11201 340 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 OVGP1Q12889 678 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 ERMARDQ5T6L9 678 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 OTOAQ7RTW8 1153 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 HERC6Q8IVU3 1022 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 SYTL1Q8IYJ3 562 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 CARNMT1Q8N4J0 409 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 CCDC33Q8N5R6 958 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 RXFP2Q8WXD0 754 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 CITED4Q96RK1 184 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 THUMPD3Q9BV44 507 aaKnown RBP12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 PTTG2Q9NZH5 202 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 FGRP09769 529 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 CXCL9Q07325 125 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 LIN52Q52LA3 116 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 DCLK3Q9C098 648 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 PREBQ9HCU5 417 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 KLHL28Q9NXS3 571 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 MEI4A8MW99 385 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 ZBTB39O15060 712 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 AP5Z1O43299 807 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 TGFB3P10600 412 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 TNNI3P19429 210 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 CPA2P48052 419 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 NUDT2P50583 147 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 RPL10AP62906 217 aaKnown RBP12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 TAB1Q15750 504 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 NDUFAF6Q330K2 333 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 NEK5Q6P3R8 708 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 RBM44Q6ZP01 1051 aaKnown RBP12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 SV2AQ7L0J3 742 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 PCSK9Q8NBP7 692 aaKnown RBP12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 APBB2Q92870 758 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 GRIP2Q9C0E4 1043 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 PDGFCQ9NRA1 345 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 SNTG2Q9NY99 539 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 ZNF232Q9UNY5 417 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 KIF1AQ12756 1690 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 FAM220BPB1ANY3 271 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 WARSP23381 471 aaKnown RBP12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 PTENP60484 403 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 EPS8Q12929 822 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 RNF220Q5VTB9 566 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 KLHL1Q9NR64 748 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 SLC24A2Q9UI40 661 aa12.33□□□□□ -0.44
ERGIC1-208ENST00000520399 AP3D1O14617 1153 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 VPS26AO75436 327 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 MICAL2O94851 1124 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 OR6A2O95222 327 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 S100A6P06703 90 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 SPIDRQ14159 915 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 HLA-DQA1Q5Y7H0 255 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 CAMK1DQ8IU85 385 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 ZDHHC17Q8IUH5 632 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 SGF29Q96ES7 293 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 MTFR1LQ9H019 292 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 WDR41Q9HAD4 459 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 COMMD9Q9P000 198 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 RBMX2Q9Y388 322 aaKnown RBP12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 TM9SF1O15321 606 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 MGRN1O60291 552 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 IFNA16P05015 189 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 TKTL1P51854 596 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 ZNF846Q147U1 533 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 LAYNQ6UX15 382 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 BNIPLQ7Z465 357 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 ENKURQ8TC29 256 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 LACRTQ9GZZ8 138 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 KCND1Q9NSA2 647 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 TBC1D13Q9NVG8 400 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 SH3BP4Q9P0V3 963 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 MAP3K6O95382 1288 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 ARF5P84085 180 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 BNIP1Q12981 228 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 FBXO47Q5MNV8 452 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 CCDC3Q9BQI4 270 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 RACGAP1Q9H0H5 632 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 A0A087X0B3 334 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 KANSL1LA0AUZ9 987 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 BTN3A3O00478 584 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 ARF4P18085 180 aaPredicted RBP12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 POU1F1P28069 291 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 NOS3P29474 1203 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 FUT11Q495W5 492 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 MTSS1LQ765P7 747 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 FNIP1Q8TF40 1166 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 NAT14Q8WUY8 206 aa12.32□□□□□ -0.44
ERGIC1-208ENST00000520399 KCTD4Q8WVF5 259 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms