RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 UBAP2Q5T6F2 1119 aaKnown RBP8.04□□□□□ -1.12
LSM1-202ENST00000520286 MTFR2Q6P444 385 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 MON1AQ86VX9 555 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 VPS52Q8N1B4 723 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 LINC01465Q8N7H1 131 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 MAFAQ8NHW3 353 aaPredicted RBP8.04□□□□□ -1.12
LSM1-202ENST00000520286 CREB3L4Q8TEY5 395 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 HS6ST2Q96MM7 605 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 GPR78Q96P69 363 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 SERINC2Q96SA4 455 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 CENPOQ9BU64 300 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.04□□□□□ -1.12
LSM1-202ENST00000520286 CIPCQ9C0C6 399 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 CCDC68Q9H2F9 335 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 SARDHQ9UL12 918 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 TTLL3Q9Y4R7 772 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 PSAT1Q9Y617 370 aa8.04□□□□□ -1.12
LSM1-202ENST00000520286 KDM3AQ9Y4C1 1321 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 PBRM1Q86U86 1689 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.03□□□□□ -1.12
LSM1-202ENST00000520286 LINC00473A8K010 186 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 TEX22C9J3V5 150 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 PRYO14603 147 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 CCNT1O60563 726 aaKnown RBP8.03□□□□□ -1.12
LSM1-202ENST00000520286 TMCC2O75069 709 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 URODP06132 367 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 ALOX12P18054 663 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 SFPQP23246 707 aaKnown RBP eCLIP8.03□□□□□ -1.12
LSM1-202ENST00000520286 MAPK4P31152 587 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 ARL3P36405 182 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 MAMLD1Q13495 774 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 DCTN2Q13561 401 aaKnown RBP8.03□□□□□ -1.12
LSM1-202ENST00000520286 BYSLQ13895 437 aaKnown RBP8.03□□□□□ -1.12
LSM1-202ENST00000520286 MFSD13AQ14CX5 517 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 CDSNQ15517 529 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 GXYLT1Q4G148 440 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 AARS2Q5JTZ9 985 aaKnown RBP8.03□□□□□ -1.12
LSM1-202ENST00000520286 ERICH6BQ5W0A0 696 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 PXKQ7Z7A4 578 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 ADGRF3Q8IZF5 1079 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 ADSSL1Q8N142 457 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 OR8H2Q8N162 312 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 C1orf131Q8NDD1 294 aaKnown RBP8.03□□□□□ -1.12
LSM1-202ENST00000520286 ETNPPLQ8TBG4 499 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 NOC3LQ8WTT2 800 aaKnown RBP8.03□□□□□ -1.12
LSM1-202ENST00000520286 NCSTNQ92542 709 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 CLSTN3Q9BQT9 956 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 LMAN2LQ9H0V9 348 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 BRF2Q9HAW0 419 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 EIF2B3Q9NR50 452 aaKnown RBP8.03□□□□□ -1.12
LSM1-202ENST00000520286 SMYD2Q9NRG4 433 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 DIAPH3Q9NSV4 1193 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 TFCP2L1Q9NZI6 479 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 KCND2Q9NZV8 630 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 SEMA5BQ9P283 1151 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 TBC1D29Q9UFV1 150 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 VPS28Q9UK41 221 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 OSGIN2Q9Y236 505 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 PTPRGP23470 1445 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 SPATA31A1Q5TZJ5 1347 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 CLSPNQ9HAW4 1339 aa8.03□□□□□ -1.12
LSM1-202ENST00000520286 ADAMTS12P58397 1594 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 CCDC151A5D8V7 595 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 TMEM232C9JQI7 657 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 TNFSF14O43557 240 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 HKR1P10072 659 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 PKMP14618 531 aaKnown RBP8.02□□□□□ -1.13
LSM1-202ENST00000520286 CCT8P50990 548 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 RPS3AP61247 264 aaKnown RBP8.02□□□□□ -1.13
LSM1-202ENST00000520286 MRPS35P82673 323 aaKnown RBP8.02□□□□□ -1.13
LSM1-202ENST00000520286 TUBA3CQ13748 450 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 PTPAQ15257 358 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 TUBA3EQ6PEY2 450 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 GALNT7Q86SF2 657 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 BRSK2Q8IWQ3 736 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 C5orf34Q96MH7 638 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 NR1H4Q96RI1 486 aaPredicted RBP8.02□□□□□ -1.13
LSM1-202ENST00000520286 ANP32EQ9BTT0 268 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 NPLQ9BXD5 320 aaPredicted RBP8.02□□□□□ -1.13
LSM1-202ENST00000520286 ITPAQ9BY32 194 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 RANBP17Q9H2T7 1088 aaKnown RBP8.02□□□□□ -1.13
LSM1-202ENST00000520286 PRKRIP1Q9H875 184 aaPredicted RBP8.02□□□□□ -1.13
LSM1-202ENST00000520286 TTC12Q9H892 705 aaPredicted RBP8.02□□□□□ -1.13
LSM1-202ENST00000520286 ASNSD1Q9NWL6 643 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 LRIT1Q9P2V4 623 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 REXO2Q9Y3B8 237 aaKnown RBP8.02□□□□□ -1.13
LSM1-202ENST00000520286 TSC22D4Q9Y3Q8 395 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 ADCY10Q96PN6 1610 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 RUSC2Q8N2Y8 1516 aa8.02□□□□□ -1.13
LSM1-202ENST00000520286 CLIC1O00299 241 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 AP3D1O14617 1153 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 DSCR3O14972 297 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 PER2O15055 1255 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 AHCYL1O43865 530 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 LAMP2P13473 410 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 HOXD12P35452 270 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 HOXD13P35453 343 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 MLH1P40692 756 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 VPS41P49754 854 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 UFM1P61960 85 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms