RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 SNAPC2Q13487 334 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 NAB1Q13506 487 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 SEMA5AQ13591 1074 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 FRG1Q14331 258 aaKnown RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 KRT72Q14CN4 511 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 SMTNL2Q2TAL5 461 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 FAM133BQ5BKY9 247 aaKnown RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 KCNT1Q5JUK3 1230 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 WASHC2DQ5SRD0 308 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 MARCH8Q5T0T0 291 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 STXBP5Q5T5C0 1151 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 FAM102AQ5T9C2 384 aaPredicted RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 STEAP4Q687X5 459 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 LVRNQ6Q4G3 990 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 RINLQ6ZS11 566 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 C3orf62Q6ZUJ4 267 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 STRADAQ7RTN6 431 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 OTOAQ7RTW8 1153 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 SLC26A11Q86WA9 606 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 TTC30AQ86WT1 665 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 CDKL3Q8IVW4 592 aaPredicted RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 EMC1Q8N766 993 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.22□□□□□ -1.57
SDC2-204ENST00000519914 PCDH19Q8TAB3 1148 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 GDAP1Q8TB36 358 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 SPATA18Q8TC71 538 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 SNRNP27Q8WVK2 155 aaKnown RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 TRAPPC12Q8WVT3 735 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 COPS5Q92905 334 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 HAUS1Q96CS2 278 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 KLHL29Q96CT2 875 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 SLC7A6OSQ96CW6 309 aaPredicted RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 MTBPQ96DY7 904 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 DTNBP1Q96EV8 351 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 CDCA5Q96FF9 252 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 APOPT1Q96IL0 206 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 HSFY1Q96LI6 401 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 ACAP3Q96P50 834 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 RAB3IPQ96QF0 476 aaPredicted RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 FDXACB1Q9BRP7 624 aaPredicted RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 MYLK2Q9H1R3 596 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 ADAMTS10Q9H324 1103 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 CCDC86Q9H6F5 360 aaKnown RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 ZWILCHQ9H900 591 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 PLAC1Q9HBJ0 212 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 POPDC2Q9HBU9 364 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 CD248Q9HCU0 757 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 EIF2B3Q9NR50 452 aaKnown RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 GDAP2Q9NXN4 497 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 DPP3Q9NY33 737 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 XPO7Q9UIA9 1087 aaKnown RBP5.22□□□□□ -1.57
SDC2-204ENST00000519914 TSPAN16Q9UKR8 245 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 TTLL3Q9Y4R7 772 aa5.22□□□□□ -1.57
SDC2-204ENST00000519914 SMIM35A0A1B0GVV1 85 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 TCRBV9S1A1TA0A576 114 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 MBLAC1A4D2B0 266 aaPredicted RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 FAM159BA6NKW6 160 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 FOXO6A8MYZ6 492 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 PIRO00625 290 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 PAPSS1O43252 624 aaPredicted RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 PRPSAP2O60256 369 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 CPNE3O75131 537 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 GPR32O75388 356 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 SPAG7O75391 227 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 LEFTY1O75610 366 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 DGKIO75912 1065 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 NEBLO76041 1014 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ALDH1A2O94788 518 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 GJB1P08034 283 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 KRT19P08727 400 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 KRT16P08779 473 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 T-ENOLP0DO92 83 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 IMPDH2P12268 514 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 KCNE1P15382 129 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 DESP17661 470 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 KRT4P19013 534 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 CA4P22748 312 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ITPKAP23677 461 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 CNTFP26441 200 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 PTPN4P29074 926 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 HOXA11P31270 313 aaPredicted RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 L1CAMP32004 1257 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 GBP2P32456 591 aaPredicted RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 GCKP35557 465 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 FDFT1P37268 417 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ELK3P41970 407 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 GCLCP48506 637 aaPredicted RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 SERPINB9P50453 376 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 RASSF2P50749 326 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 BCAT1P54687 386 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 HDAC4P56524 1084 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 YWHAZP63104 245 aaKnown RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 CCNA1P78396 465 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 ADAM17P78536 824 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 PLCB3Q01970 1234 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 GAD2Q05329 585 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 GRIK3Q13003 919 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 GRB14Q14449 540 aa5.21□□□□□ -1.58
SDC2-204ENST00000519914 PRKD1Q15139 912 aaPredicted RBP5.21□□□□□ -1.58
SDC2-204ENST00000519914 TAF5Q15542 800 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms