RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 NT5C3BQ969T7 300 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 AGAP3Q96P47 875 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 NPY6RQ99463 290 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 CENPKQ9BS16 269 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 RTKNQ9BST9 563 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 ILKAPQ9H0C8 392 aaPredicted RBP11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 FAM49AQ9H0Q0 323 aaPredicted RBP11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 CXCL16Q9H2A7 254 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 ZDHHC7Q9NXF8 308 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 NSMCE4AQ9NXX6 385 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 BCAP29Q9UHQ4 241 aa11.6□□□□□ -0.55
NUDCD1-203ENST00000519607 DICER1Q9UPY3 1922 aaKnown RBP11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 ZNF195O14628 629 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 DCXO43602 365 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 HCRTO43612 131 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 THRAP10827 490 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 NPR3P17342 541 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 PRKAA2P54646 552 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 CSE1LP55060 971 aaKnown RBP11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 SATB1Q01826 763 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 ROR2Q01974 943 aaKnown RBP11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 BTKQ06187 659 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 TMEM62Q0P6H9 643 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 TBL3Q12788 808 aaKnown RBP11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 ZNF792Q3KQV3 632 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 ARL13BQ3SXY8 428 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 ACAD11Q709F0 780 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 MAVSQ7Z434 540 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 CMC1Q7Z7K0 106 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 PDSS2Q86YH6 399 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 GALNT15Q8N3T1 639 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 GPRC5AQ8NFJ5 357 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 URGCPQ8TCY9 931 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 KCTD13Q8WZ19 329 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 CCDC124Q96CT7 223 aaKnown RBP11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 OPTNQ96CV9 577 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 IFT43Q96FT9 208 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 ADAMTS10Q9H324 1103 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 NMRAL1Q9HBL8 299 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 SETD4Q9NVD3 440 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 TRHDEQ9UKU6 1024 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 POMPQ9Y244 141 aa11.59□□□□□ -0.55
NUDCD1-203ENST00000519607 SMIM28A0A1B0GU29 152 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 KCNK1O00180 336 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 DCLK1O15075 740 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 BUD23O43709 281 aaKnown RBP11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 PRKCGP05129 697 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 ZCCHC18P0CG32 403 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 AKAP5P24588 427 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 DNAJB2P25686 324 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 PTPN3P26045 913 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 TPI1P60174 286 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 RPL26P61254 145 aaKnown RBP11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 MPP3Q13368 585 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 DPYSQ14117 519 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 RBBP5Q15291 538 aaKnown RBP11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 ANKRD20A4Q4UJ75 823 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 INTS6LQ5JSJ4 861 aaKnown RBP11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 VWA5B1Q5TIE3 1220 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 MAMDC4Q6UXC1 1216 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 TNS4Q8IZW8 715 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 TDRD5Q8NAT2 981 aaKnown RBP11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 RDH11Q8TC12 318 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 ZFAND2BQ8WV99 257 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 ATXN7L3BQ96GX2 97 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 FCRL3Q96P31 734 aaPredicted RBP11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 VAT1Q99536 393 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 TRIM4Q9C037 500 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 IL22Q9GZX6 179 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 NXF3Q9H4D5 531 aaKnown RBP11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 TCF7L2Q9NQB0 619 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 TLK1Q9UKI8 766 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 ANKRD6Q9Y2G4 727 aa11.58□□□□□ -0.55
NUDCD1-203ENST00000519607 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 PDE5AO76074 875 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 FBXO21O94952 628 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 MMP3P08254 477 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 ITGAXP20702 1163 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 ADRA1BP35368 520 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 HCAR3P49019 387 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 POLE2P56282 527 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 USP4Q13107 963 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 KLF10Q13118 480 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 PRPSAP1Q14558 356 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 HSP90AA5PQ58FG0 334 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 RASIP1Q5U651 963 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 C16orf89Q6UX73 402 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 FRMD7Q6ZUT3 714 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 RAPH1Q70E73 1250 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 SDCCAG8Q86SQ7 713 aaPredicted RBP11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 SETD3Q86TU7 594 aaPredicted RBP11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 LCA5Q86VQ0 697 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 KCNMB4Q86W47 210 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 TOP6BLQ8N6T0 577 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 ZNF781Q8N8C0 355 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 GDPD5Q8WTR4 605 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 NTAN1Q96AB6 310 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 MED10Q9BTT4 135 aa11.58□□□□□ -0.56
NUDCD1-203ENST00000519607 SHCBP1LQ9BZQ2 653 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms