RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 SOD2P04179 222 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 VIMP08670 466 aaKnown RBP16.99■□□□□ 0.31
PCM1-206ENST00000518537 GJA8P48165 433 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 MS4A13Q5J8X5 152 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 TMCO2Q7Z6W1 182 aaPredicted RBP16.99■□□□□ 0.31
PCM1-206ENST00000518537 LRRC6Q86X45 466 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 CCNJLQ8IV13 435 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 ZNF689Q96CS4 500 aaPredicted RBP16.99■□□□□ 0.31
PCM1-206ENST00000518537 TMEM169Q96HH4 297 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 SGSM3Q96HU1 749 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 CEP295NLQ96MC4 621 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 ZNF317Q96PQ6 595 aaPredicted RBP16.99■□□□□ 0.31
PCM1-206ENST00000518537 GORASP1Q9BQQ3 440 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 TRIM56Q9BRZ2 755 aaKnown RBP16.99■□□□□ 0.31
PCM1-206ENST00000518537 TTLL2Q9BWV7 592 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 PIH1D1Q9NWS0 290 aaKnown RBP16.99■□□□□ 0.31
PCM1-206ENST00000518537 COL4A6Q14031 1691 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 LTBP2Q14767 1821 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 BRCA2P51587 3418 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 ERI2A8K979 691 aaKnown RBP16.99■□□□□ 0.31
PCM1-206ENST00000518537 TLR5O60602 858 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 MT-ND3P03897 115 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 ZDHHC11BP0C7U3 371 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 CCNB1P14635 433 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 CRADDP78560 199 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 DEFB103AP81534 67 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 OR52K1Q8NGK4 314 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 MZB1Q8WU39 189 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 CKAP2Q8WWK9 683 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 CLSTN3Q9BQT9 956 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 ZYG11BQ9C0D3 744 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 CCSER2Q9H7U1 834 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 NDFIP2Q9NV92 336 aa16.99■□□□□ 0.31
PCM1-206ENST00000518537 AFF4Q9UHB7 1163 aaKnown RBP16.99■□□□□ 0.31
PCM1-206ENST00000518537 CXorf49A8MYA2 514 aaPredicted RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 PSMD3O43242 534 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 SUN1O94901 812 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 TIMP1P01033 207 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 C1QAP02745 245 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 KRT4P19013 534 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 CA4P22748 312 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 BTG3Q14201 252 aaPredicted RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 QPCTQ16769 361 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 TTC39BQ5VTQ0 682 aaPredicted RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 STEAP4Q687X5 459 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 NUGGCQ68CJ6 796 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 TIGD7Q6NT04 549 aaPredicted RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 LRRC34Q8IZ02 419 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 SLC39A11Q8N1S5 342 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 DPF3Q92784 378 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 CDK5RAP1Q96SZ6 601 aaKnown RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 PAIP2Q9BPZ3 127 aaKnown RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 NAT9Q9BTE0 207 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 SSU72Q9NP77 194 aaKnown RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 SYBUQ9NX95 663 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 DONSONQ9NYP3 566 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 FNIP2Q9P278 1114 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 MATN3O15232 486 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 MAFKO60675 156 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 CSF2RAP15509 400 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 RHOQP17081 205 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 PGAM1P18669 254 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 KPNA1P52294 538 aaPredicted RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 SLC18A1P54219 525 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 IL9RQ01113 521 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 LGSNQ5TDP6 509 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 AFMIDQ63HM1 303 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 RAP1GAP2Q684P5 730 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 ZNF683Q8IZ20 524 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 DNAAF3Q8N9W5 541 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 ZSCAN18Q8TBC5 510 aaPredicted RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 ARMC5Q96C12 935 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 MLPHQ9BV36 600 aaPredicted RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 HERC2P3Q9BVR0 1158 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 NSRP1Q9H0G5 558 aaKnown RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 SMYD2Q9NRG4 433 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 SAMD15Q9P1V8 674 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 PPARGC1AQ9UBK2 798 aaKnown RBP16.98■□□□□ 0.31
PCM1-206ENST00000518537 ZNF180Q9UJW8 692 aa16.98■□□□□ 0.31
PCM1-206ENST00000518537 FAM159BA6NKW6 160 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 USP12O75317 370 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 SEC24AO95486 1093 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 IGLV3-27P01718 113 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 LAG3P18627 525 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 PAPOLAP51003 745 aaKnown RBP16.97■□□□□ 0.31
PCM1-206ENST00000518537 DSG1Q02413 1049 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 RING1Q06587 406 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 OLIG2Q13516 323 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 KCTD11Q693B1 232 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 TRMT10BQ6PF06 316 aaKnown RBP16.97■□□□□ 0.31
PCM1-206ENST00000518537 LRRC49Q8IUZ0 686 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 PDZD8Q8NEN9 1154 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 ARNTL2Q8WYA1 636 aa16.97■□□□□ 0.31
PCM1-206ENST00000518537 ALKBH8Q96BT7 664 aaKnown RBP16.97■□□□□ 0.31
PCM1-206ENST00000518537 ZNF512Q96ME7 567 aaPredicted RBP16.97■□□□□ 0.31
PCM1-206ENST00000518537 EFCAB14O75071 495 aa16.96■□□□□ 0.31
PCM1-206ENST00000518537 FAM155BO75949 473 aa16.96■□□□□ 0.31
PCM1-206ENST00000518537 KRT37O76014 449 aa16.96■□□□□ 0.31
PCM1-206ENST00000518537 NEBLO76041 1014 aa16.96■□□□□ 0.31
PCM1-206ENST00000518537 RAG1P15918 1043 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms