RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.94■■□□□ 1.42
SLIT3-204ENST00000518140 PIH1D1Q9NWS0 290 aaKnown RBP23.94■■□□□ 1.42
SLIT3-204ENST00000518140 TLL1O43897 1013 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 MAFKO60675 156 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 ATP2A2P16615 1042 aaKnown RBP23.93■■□□□ 1.42
SLIT3-204ENST00000518140 OLIG2Q13516 323 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 PSRC1Q6PGN9 363 aaPredicted RBP23.93■■□□□ 1.42
SLIT3-204ENST00000518140 BCAS4Q8TDM0 211 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 USP33Q8TEY7 942 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 WBP2Q969T9 261 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 TRMT2BQ96GJ1 504 aaKnown RBP23.93■■□□□ 1.42
SLIT3-204ENST00000518140 FERMT1Q9BQL6 677 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 SHROOM3Q8TF72 1996 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 IGLV3-10A0A075B6K4 115 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 TCEA3O75764 348 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 DNAJB1P25685 340 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 CCT5P48643 541 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 SPARCL1Q14515 664 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 STAT4Q14765 748 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 VEPH1Q14D04 833 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 CCDC38Q502W7 563 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 TEX44Q53QW1 395 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 TNFAIP8L3Q5GJ75 292 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 PPP1R21Q6ZMI0 780 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 PALM2Q8IXS6 379 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 MPP5Q8N3R9 675 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 CNTD1Q8N815 330 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 SP7Q8TDD2 431 aaPredicted RBP23.93■■□□□ 1.42
SLIT3-204ENST00000518140 TRIM56Q9BRZ2 755 aaKnown RBP23.93■■□□□ 1.42
SLIT3-204ENST00000518140 ZYG11BQ9C0D3 744 aa23.93■■□□□ 1.42
SLIT3-204ENST00000518140 HBS1LQ9Y450 684 aaKnown RBP23.93■■□□□ 1.42
SLIT3-204ENST00000518140 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.92■■□□□ 1.42
SLIT3-204ENST00000518140 WASH4PA8MWX3 477 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 EBAG9O00559 213 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 MAGEA3P43357 314 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 PAPOLAP51003 745 aaKnown RBP23.92■■□□□ 1.42
SLIT3-204ENST00000518140 EPHB3P54753 998 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.92■■□□□ 1.42
SLIT3-204ENST00000518140 LZTR1Q8N653 840 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 PPM1EQ8WY54 764 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 PSMG2Q969U7 264 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 TSGA13Q96PP4 275 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 CYP2S1Q96SQ9 504 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 PLAC1Q9HBJ0 212 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 IGSF9Q9P2J2 1179 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 PPARGC1AQ9UBK2 798 aaKnown RBP23.92■■□□□ 1.42
SLIT3-204ENST00000518140 TBK1Q9UHD2 729 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 RABGEF1Q9UJ41 708 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 CHD7Q9P2D1 2997 aa23.92■■□□□ 1.42
SLIT3-204ENST00000518140 DRGXA6NNA5 263 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 KLKB1P03952 638 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 RHOQP17081 205 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 SLC6A4P31645 630 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 EFTUD2Q15029 972 aaKnown RBP eCLIP23.91■■□□□ 1.42
SLIT3-204ENST00000518140 EMC10Q5UCC4 262 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 RFWD3Q6PCD5 774 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 KDM7AQ6ZMT4 941 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 ATPAF2Q8N5M1 289 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 ATP11CQ8NB49 1132 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 MRRFQ96E11 262 aaKnown RBP23.91■■□□□ 1.42
SLIT3-204ENST00000518140 CDK5RAP1Q96SZ6 601 aaKnown RBP23.91■■□□□ 1.42
SLIT3-204ENST00000518140 LAMA3Q16787 3333 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 HIDE1A8MVS5 230 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 ARHGEF15O94989 841 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 BMPR1AP36894 532 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 KPNA1P52294 538 aaPredicted RBP23.91■■□□□ 1.42
SLIT3-204ENST00000518140 CBLBQ13191 982 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 LILRA6Q6PI73 481 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 CHSY1Q86X52 802 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 GPR65Q8IYL9 337 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 CFAP52Q8N1V2 620 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 FBF1Q8TES7 1133 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 SIGLEC10Q96LC7 697 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 RPRD1AQ96P16 312 aaPredicted RBP23.91■■□□□ 1.42
SLIT3-204ENST00000518140 KLHL5Q96PQ7 755 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 SLC22A12Q96S37 553 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 TCF25Q9BQ70 676 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 ZNF212Q9UDV6 495 aa23.91■■□□□ 1.42
SLIT3-204ENST00000518140 EXOC1LA0A1B0GW35 172 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 POC1B-GALNT4F8VUJ3 575 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 OAS1P00973 400 aaKnown RBP23.9■■□□□ 1.42
SLIT3-204ENST00000518140 F11P03951 625 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 MYOGP15173 224 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 TACR2P21452 398 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 CCNCP24863 283 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 FAM133BQ5BKY9 247 aaKnown RBP23.9■■□□□ 1.42
SLIT3-204ENST00000518140 NUGGCQ68CJ6 796 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 KLHDC10Q6PID8 442 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 OTOP3Q7RTS5 596 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 TEKT5Q96M29 485 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 TMEM248Q9NWD8 314 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 PLXNA4Q9HCM2 1894 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 MTSS1O43312 755 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 CCNB1P14635 433 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 NFKB1P19838 968 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 CTNNB1P35222 781 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 NUMBP49757 651 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 COG7P83436 770 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 DENND1CQ8IV53 801 aa23.9■■□□□ 1.42
SLIT3-204ENST00000518140 UMODL1-AS1Q8N2C9 162 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms