RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 GUCY2DQ02846 1103 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 PPIDQ08752 370 aaKnown RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 CBX2Q14781 532 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 PPP1R7Q15435 360 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 DUPD1Q68J44 220 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 DARS2Q6PI48 645 aaKnown RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 EP400NLQ6ZTU2 488 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 CHST9Q7L1S5 443 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 GET4Q7L5D6 327 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 PRUNE1Q86TP1 453 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 ARID3BQ8IVW6 561 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 BBS7Q8IWZ6 715 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 CFAP52Q8N1V2 620 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 UMODL1-AS1Q8N2C9 162 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 CPXM2Q8N436 756 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 LZTR1Q8N653 840 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 ZSCAN18Q8TBC5 510 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 TFB1MQ8WVM0 346 aaKnown RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 CASKIN2Q8WXE0 1202 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 HDAC11Q96DB2 347 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 RTP4Q96DX8 246 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 LGMNQ99538 433 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 DDX50Q9BQ39 737 aaKnown RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 HINFPQ9BQA5 517 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 ERP44Q9BS26 406 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 PARD6BQ9BYG5 372 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 RAB17Q9H0T7 212 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 S1PR5Q9H228 398 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 ADAM7Q9H2U9 754 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 KIF9Q9HAQ2 790 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 USP29Q9HBJ7 922 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 PCDH9Q9HC56 1237 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 GDF3Q9NR23 364 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 TDP1Q9NUW8 608 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 CLDND1Q9NY35 253 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 FEZ2Q9UHY8 353 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 RAB21Q9UL25 225 aa10.86□□□□□ -0.67
PABPC1-203ENST00000517921 ZFP37Q9Y6Q3 630 aaPredicted RBP10.86□□□□□ -0.67
PABPC1-203ENST00000517921 COL4A2P08572 1712 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-203ENST00000517921 A0A1B0GVM2 712 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 TCAF2A6NFQ2 919 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 NCAM2O15394 837 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 KCNN4O15554 427 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 TSPAN3O60637 253 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 ZSCAN5DPP0CG00 497 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 BMP1P13497 986 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 MX2P20592 715 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 TNFRSF8P28908 595 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 LTBRP36941 435 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 RPL21P46778 160 aaKnown RBP10.85□□□□□ -0.67
PABPC1-203ENST00000517921 NDST2P52849 883 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 NRLP54845 237 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 CDH4P55283 916 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 TRIP13Q15645 432 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-203ENST00000517921 TTC39BQ5VTQ0 682 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-203ENST00000517921 WDR93Q6P2C0 686 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 GSTA5Q7RTV2 222 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 FAM71DQ8N9W8 422 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 TDRD5Q8NAT2 981 aaKnown RBP10.85□□□□□ -0.67
PABPC1-203ENST00000517921 HJURPQ8NCD3 748 aaPredicted RBP10.85□□□□□ -0.67
PABPC1-203ENST00000517921 TTC16Q8NEE8 873 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 DEPDC1BQ8WUY9 529 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 RSAD2Q8WXG1 361 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 FGF13Q92913 245 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 PABPC5Q96DU9 382 aaKnown RBP10.85□□□□□ -0.67
PABPC1-203ENST00000517921 RSPRY1Q96DX4 576 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 P2RY11Q96G91 374 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 MSLNLQ96KJ4 702 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 TRIM31Q9BZY9 425 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 SLC39A8Q9C0K1 460 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 RETREG1Q9H6L5 497 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 EPB41L5Q9HCM4 733 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 DONSONQ9NYP3 566 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 ASIC3Q9UHC3 531 aa10.85□□□□□ -0.67
PABPC1-203ENST00000517921 UTP11Q9Y3A2 253 aaKnown RBP10.85□□□□□ -0.67
PABPC1-203ENST00000517921 XIRP2A4UGR9 3374 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 RASA4BC9J798 803 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 DFFAO00273 331 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 RASA4O43374 803 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 TBL1XO60907 577 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 CLDN11O75508 207 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 IFNB1P01574 187 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 MYBL2P10244 700 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 IVDP26440 423 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 ECHS1P30084 290 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 STIP1P31948 543 aaKnown RBP10.84□□□□□ -0.67
PABPC1-203ENST00000517921 VPS41P49754 854 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 DRG2P55039 364 aaKnown RBP10.84□□□□□ -0.67
PABPC1-203ENST00000517921 AP1B1Q10567 949 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 TRADDQ15628 312 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 RNF43Q68DV7 783 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 HEATR6Q6AI08 1181 aaKnown RBP10.84□□□□□ -0.67
PABPC1-203ENST00000517921 CES5AQ6NT32 575 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 ARHGAP36Q6ZRI8 547 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 GSPT2Q8IYD1 628 aaKnown RBP10.84□□□□□ -0.67
PABPC1-203ENST00000517921 ATPAF2Q8N5M1 289 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 CCDC89Q8N998 374 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 OR52K2Q8NGK3 314 aa10.84□□□□□ -0.67
PABPC1-203ENST00000517921 CCHCR1Q8TD31 782 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms