RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 SCML2Q9UQR0 700 aa11.03□□□□□ -0.64
SPIDR-204ENST00000517824 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.64
SPIDR-204ENST00000517824 ANKRD36A6QL64 1941 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 TBKBP1A7MCY6 615 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 FAM72CH0Y354 149 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 MSI1O43347 362 aaKnown RBP11.02□□□□□ -0.65
SPIDR-204ENST00000517824 SNX3O60493 162 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 PQBP1O60828 265 aaKnown RBP11.02□□□□□ -0.65
SPIDR-204ENST00000517824 PAGE1O75459 146 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 DCTN3O75935 186 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 ANXA9O76027 345 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.65
SPIDR-204ENST00000517824 ASMTLO95671 621 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 AP2A1O95782 977 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 GSTA1P08263 222 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 PYGBP11216 843 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 ADRA1DP25100 572 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 DNAJB2P25686 324 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 YWHAQP27348 245 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 MAGEA3P43357 314 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 TBX4P57082 545 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 FAM189BP81408 668 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 ZNF33AQ06730 810 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 MGAT5Q09328 741 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 CBLBQ13191 982 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 DNAJC3Q13217 504 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 MTA1Q13330 715 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 MGAT5BQ3V5L5 792 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 FAM72AQ5TYM5 149 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 STEAP4Q687X5 459 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 FAM72DQ6L9T8 149 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 MARK2Q7KZI7 788 aaKnown RBP11.02□□□□□ -0.65
SPIDR-204ENST00000517824 TRPM8Q7Z2W7 1104 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 PIGWQ7Z7B1 504 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 LRRTM3Q86VH5 581 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 FAM72BQ86X60 149 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 GABPB2Q8TAK5 448 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-204ENST00000517824 SPPL2BQ8TCT7 592 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 TCP10LQ8TDR4 215 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 C2orf15Q8WU43 125 aaKnown RBP11.02□□□□□ -0.65
SPIDR-204ENST00000517824 SREK1Q8WXA9 508 aaKnown RBP11.02□□□□□ -0.65
SPIDR-204ENST00000517824 LINC01599Q8WXQ3 324 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 CELF6Q96J87 481 aaKnown RBP11.02□□□□□ -0.65
SPIDR-204ENST00000517824 TSNARE1Q96NA8 513 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 GUCD1Q96NT3 240 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 PGLYRP2Q96PD5 576 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 KLF6Q99612 283 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-204ENST00000517824 TMEM175Q9BSA9 504 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 NACA2Q9H009 215 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 PCMTD2Q9NV79 361 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 SYBUQ9NX95 663 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 ARHGEF38Q9NXL2 777 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 VANGL2Q9ULK5 521 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 AAR2Q9Y312 384 aaKnown RBP11.02□□□□□ -0.65
SPIDR-204ENST00000517824 SNX10Q9Y5X0 201 aa11.02□□□□□ -0.65
SPIDR-204ENST00000517824 LTBP2Q14767 1821 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 WDR91A4D1P6 747 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 FAM159BA6NKW6 160 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 F8W810 466 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 TYROBPO43914 113 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 FSBPO95073 299 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 ALDH2P05091 517 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 NFKB1P19838 968 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 TAC1P20366 129 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 NPY2RP49146 381 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 GEMP55040 296 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 WDR4P57081 412 aaKnown RBP11.01□□□□□ -0.65
SPIDR-204ENST00000517824 PDE1BQ01064 536 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 WASHC5Q12768 1159 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 MBTPS1Q14703 1052 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 CRYMQ14894 314 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 C10orf120Q5SQS8 335 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 SPOUT1Q5T280 376 aaKnown RBP11.01□□□□□ -0.65
SPIDR-204ENST00000517824 ACBD5Q5T8D3 534 aaPredicted RBP11.01□□□□□ -0.65
SPIDR-204ENST00000517824 ATG16L1Q676U5 607 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 FAM109BQ6ICB4 259 aaPredicted RBP11.01□□□□□ -0.65
SPIDR-204ENST00000517824 MSANTD2Q6P1R3 559 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 FUT10Q6P4F1 479 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 CD300LGQ6UXG3 332 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 RGS9BPQ6ZS82 235 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 ANKS3Q6ZW76 656 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 ZNF534Q76KX8 674 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 BHLHA9Q7RTU4 235 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 MPP5Q8N3R9 675 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 NPWQ8N729 165 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 BANPQ8N9N5 519 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
SPIDR-204ENST00000517824 NETO2Q8NC67 525 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 PPHLN1Q8NEY8 458 aaKnown RBP11.01□□□□□ -0.65
SPIDR-204ENST00000517824 TET1Q8NFU7 2136 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 USP33Q8TEY7 942 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 CASP10Q92851 521 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 FCRL2Q96LA5 508 aaPredicted RBP11.01□□□□□ -0.65
SPIDR-204ENST00000517824 SIGLEC10Q96LC7 697 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 CDK5RAP1Q96SZ6 601 aaKnown RBP11.01□□□□□ -0.65
SPIDR-204ENST00000517824 FSD1LQ9BXM9 530 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 SP110Q9HB58 689 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 COMMD8Q9NX08 183 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 NSMCE4AQ9NXX6 385 aa11.01□□□□□ -0.65
SPIDR-204ENST00000517824 GMIPQ9P107 970 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms