RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 SH2D5Q6ZV89 423 aa27.18■■□□□ 1.94
COL13A1-210ENST00000517713 DEFB128Q7Z7B8 93 aa27.18■■□□□ 1.94
COL13A1-210ENST00000517713 LRRC43Q8N309 656 aa27.18■■□□□ 1.94
COL13A1-210ENST00000517713 ZSCAN18Q8TBC5 510 aaPredicted RBP27.18■■□□□ 1.94
COL13A1-210ENST00000517713 OXNAD1Q96HP4 312 aaPredicted RBP27.18■■□□□ 1.94
COL13A1-210ENST00000517713 CRISPLD1Q9H336 500 aa27.18■■□□□ 1.94
COL13A1-210ENST00000517713 SYBUQ9NX95 663 aa27.18■■□□□ 1.94
COL13A1-210ENST00000517713 NUP205Q92621 2012 aa27.18■■□□□ 1.94
COL13A1-210ENST00000517713 UGT1A9O60656 530 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 VNN2O95498 520 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 PDK4Q16654 411 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 KCTD11Q693B1 232 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 C14orf80Q86SX3 495 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 ATPAF2Q8N5M1 289 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 OR52K1Q8NGK4 314 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 BCL7CQ8WUZ0 217 aaPredicted RBP27.17■■□□□ 1.94
COL13A1-210ENST00000517713 SPATA17Q96L03 361 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 OXCT2Q9BYC2 517 aaPredicted RBP27.17■■□□□ 1.94
COL13A1-210ENST00000517713 UGT1A7Q9HAW7 530 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 UGT1A10Q9HAW8 530 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 UGT1A8Q9HAW9 530 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 CLIC5Q9NZA1 410 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 FNDC1Q4ZHG4 1894 aaPredicted RBP27.17■■□□□ 1.94
COL13A1-210ENST00000517713 ARHGAP42A6NI28 874 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 LPXNO60711 386 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 OAS1P00973 400 aaKnown RBP27.17■■□□□ 1.94
COL13A1-210ENST00000517713 HAPLN1P10915 354 aaPredicted RBP27.17■■□□□ 1.94
COL13A1-210ENST00000517713 PYGBP11216 843 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 EFEMP1Q12805 493 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 OLIG2Q13516 323 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 ARHGAP36Q6ZRI8 547 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 RGS9BPQ6ZS82 235 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 CCDC121Q6ZUS5 278 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 TTC17Q96AE7 1141 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 MLPHQ9BV36 600 aaPredicted RBP27.17■■□□□ 1.94
COL13A1-210ENST00000517713 SLC39A8Q9C0K1 460 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 TLR8Q9NR97 1041 aaKnown RBP27.17■■□□□ 1.94
COL13A1-210ENST00000517713 SHROOM3Q8TF72 1996 aa27.17■■□□□ 1.94
COL13A1-210ENST00000517713 KRT38O76015 456 aa27.16■■□□□ 1.94
COL13A1-210ENST00000517713 C2orf15Q8WU43 125 aaKnown RBP27.16■■□□□ 1.94
COL13A1-210ENST00000517713 APOPT1Q96IL0 206 aa27.16■■□□□ 1.94
COL13A1-210ENST00000517713 USP15Q9Y4E8 981 aaPredicted RBP27.16■■□□□ 1.94
COL13A1-210ENST00000517713 PSEN1P49768 467 aa27.16■■□□□ 1.94
COL13A1-210ENST00000517713 TAF10Q12962 218 aa27.16■■□□□ 1.94
COL13A1-210ENST00000517713 PIK3R6Q5UE93 754 aa27.16■■□□□ 1.94
COL13A1-210ENST00000517713 PRSS55Q6UWB4 352 aaPredicted RBP27.16■■□□□ 1.94
COL13A1-210ENST00000517713 MTBPQ96DY7 904 aa27.16■■□□□ 1.94
COL13A1-210ENST00000517713 CASS4Q9NQ75 786 aa27.16■■□□□ 1.94
COL13A1-210ENST00000517713 OLA1Q9NTK5 396 aaKnown RBP27.16■■□□□ 1.94
COL13A1-210ENST00000517713 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.16■■□□□ 1.94
COL13A1-210ENST00000517713 COMMD8Q9NX08 183 aa27.16■■□□□ 1.94
COL13A1-210ENST00000517713 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.15■■□□□ 1.94
COL13A1-210ENST00000517713 USP12O75317 370 aa27.15■■□□□ 1.94
COL13A1-210ENST00000517713 CCNB1P14635 433 aa27.15■■□□□ 1.94
COL13A1-210ENST00000517713 DUSP4Q13115 394 aa27.15■■□□□ 1.94
COL13A1-210ENST00000517713 PRPSAP1Q14558 356 aa27.15■■□□□ 1.94
COL13A1-210ENST00000517713 CRYMQ14894 314 aa27.15■■□□□ 1.94
COL13A1-210ENST00000517713 UNC5BQ8IZJ1 945 aa27.15■■□□□ 1.94
COL13A1-210ENST00000517713 RTL3Q8N8U3 475 aaKnown RBP27.15■■□□□ 1.94
COL13A1-210ENST00000517713 PITPNM3Q9BZ71 974 aa27.15■■□□□ 1.94
COL13A1-210ENST00000517713 NDFIP2Q9NV92 336 aa27.15■■□□□ 1.94
COL13A1-210ENST00000517713 MPP6Q9NZW5 540 aa27.15■■□□□ 1.94
COL13A1-210ENST00000517713 SLC17A7Q9P2U7 560 aa27.15■■□□□ 1.94
COL13A1-210ENST00000517713 UPP2O95045 317 aa27.14■■□□□ 1.94
COL13A1-210ENST00000517713 ADRA1DP25100 572 aa27.14■■□□□ 1.94
COL13A1-210ENST00000517713 SERPINB9P50453 376 aa27.14■■□□□ 1.94
COL13A1-210ENST00000517713 NEK3P51956 506 aa27.14■■□□□ 1.94
COL13A1-210ENST00000517713 RASIP1Q5U651 963 aa27.14■■□□□ 1.94
COL13A1-210ENST00000517713 CNTD1Q8N815 330 aa27.14■■□□□ 1.94
COL13A1-210ENST00000517713 DNAAF3Q8N9W5 541 aa27.14■■□□□ 1.94
COL13A1-210ENST00000517713 LRRC8CQ8TDW0 803 aa27.14■■□□□ 1.94
COL13A1-210ENST00000517713 USP33Q8TEY7 942 aa27.14■■□□□ 1.94
COL13A1-210ENST00000517713 BFARQ9NZS9 450 aa27.14■■□□□ 1.94
COL13A1-210ENST00000517713 WASH4PA8MWX3 477 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 MAFKO60675 156 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 TBX18O95935 607 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 POLBP06746 335 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 RPL10AP62906 217 aaKnown RBP27.14■■□□□ 1.93
COL13A1-210ENST00000517713 TLE2Q04725 743 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 DNAJC3Q13217 504 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 AFMIDQ63HM1 303 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.14■■□□□ 1.93
COL13A1-210ENST00000517713 SPATA21Q7Z572 469 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 CDKL2Q92772 493 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 GRAMD1AQ96CP6 724 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 C12orf65Q9H3J6 166 aaKnown RBP27.14■■□□□ 1.93
COL13A1-210ENST00000517713 VANGL2Q9ULK5 521 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 CDY1Q9Y6F8 540 aa27.14■■□□□ 1.93
COL13A1-210ENST00000517713 ALDH7A1P49419 539 aaKnown RBP27.13■■□□□ 1.93
COL13A1-210ENST00000517713 NIPAL4Q0D2K0 466 aa27.13■■□□□ 1.93
COL13A1-210ENST00000517713 BMPR2Q13873 1038 aa27.13■■□□□ 1.93
COL13A1-210ENST00000517713 TRIP4Q15650 581 aaPredicted RBP27.13■■□□□ 1.93
COL13A1-210ENST00000517713 TRIM60Q495X7 471 aa27.13■■□□□ 1.93
COL13A1-210ENST00000517713 MARK2Q7KZI7 788 aaKnown RBP27.13■■□□□ 1.93
COL13A1-210ENST00000517713 ATP6V0D2Q8N8Y2 350 aa27.13■■□□□ 1.93
COL13A1-210ENST00000517713 LRRC40Q9H9A6 602 aa27.13■■□□□ 1.93
COL13A1-210ENST00000517713 MRPL42Q9Y6G3 142 aaKnown RBP27.13■■□□□ 1.93
COL13A1-210ENST00000517713 CCT8L1PA6NM43 557 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 MATN3O15232 486 aa27.12■■□□□ 1.93
COL13A1-210ENST00000517713 PSMD3O43242 534 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms