RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 CCDC134Q9H6E4 229 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.35□□□□□ -1.71
LINC01088-211ENST00000515597 RAB21Q9UL25 225 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 TRPC5Q9UL62 973 aaPredicted RBP4.35□□□□□ -1.71
LINC01088-211ENST00000515597 SLC12A4Q9UP95 1085 aa4.35□□□□□ -1.71
LINC01088-211ENST00000515597 EIF4G1Q04637 1599 aaKnown RBP4.35□□□□□ -1.71
LINC01088-211ENST00000515597 GAGE12JA6NER3 117 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 GOLGA6L3A6NEY3 463 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 SLC38A8A6NNN8 435 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 KIF28PB7ZC32 967 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 ACOT8O14734 319 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 DNPH1O43598 174 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 ASNA1O43681 348 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 NEURL1O76050 574 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 LARGE1O95461 756 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 LCKP06239 509 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 AKT1P31749 480 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 ADPRHP54922 357 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 SLC4A8Q2Y0W8 1093 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 INO80DQ53TQ3 878 aaPredicted RBP4.34□□□□□ -1.71
LINC01088-211ENST00000515597 C10orf76Q5T2E6 689 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 ERAP2Q6P179 960 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 KDELC2Q7Z4H8 507 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 RBM23Q86U06 439 aaKnown RBP4.34□□□□□ -1.71
LINC01088-211ENST00000515597 FAM186BQ8IYM0 893 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 FAM71BQ8TC56 605 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 ADAD1Q96M93 576 aaKnown RBP4.34□□□□□ -1.71
LINC01088-211ENST00000515597 MECRQ9BV79 373 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 MAP6D1Q9H9H5 199 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 NLRC4Q9NPP4 1024 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 CD93Q9NPY3 652 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 SIRT3Q9NTG7 399 aaPredicted RBP4.34□□□□□ -1.71
LINC01088-211ENST00000515597 MYO6Q9UM54 1294 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 TNFSF13BQ9Y275 285 aa4.34□□□□□ -1.71
LINC01088-211ENST00000515597 COPG1Q9Y678 874 aaKnown RBP4.34□□□□□ -1.71
LINC01088-211ENST00000515597 NACADO15069 1562 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 FAM90A18PA6NE21 464 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 FAM90A16PA6NEW6 464 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 AQP12BA6NM10 295 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 FAM90A9PA6NNJ1 464 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 FAM90A5PA8MXJ8 464 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 MCIDASD6RGH6 385 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 KLKB1P03952 638 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 FAM90A15PP0C7V4 464 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 FAM90A14PP0C7W9 464 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 PEPDP12955 493 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 PPM1AP35813 382 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 TECP42680 631 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 RFX2P48378 723 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 RRP1P56182 461 aaKnown RBP4.33□□□□□ -1.72
LINC01088-211ENST00000515597 EGR4Q05215 589 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 SF3A3Q12874 501 aaKnown RBP eCLIP4.33□□□□□ -1.72
LINC01088-211ENST00000515597 PTK2BQ14289 1009 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 STARD3Q14849 445 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 NADSYN1Q6IA69 706 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 CTU1Q7Z7A3 348 aaKnown RBP4.33□□□□□ -1.72
LINC01088-211ENST00000515597 CUZD1Q86UP6 607 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 ELP5Q8TE02 316 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 DNASE2BQ8WZ79 361 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 SLITRK1Q96PX8 696 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 NPAS1Q99742 590 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 ELAC2Q9BQ52 826 aaKnown RBP4.33□□□□□ -1.72
LINC01088-211ENST00000515597 CNTN6Q9UQ52 1028 aa4.33□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3DA0A087WVF3 549 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3IA0A087WXS9 549 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 A0A087WYN8 130 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3EA0A087X179 549 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3KA0A087X1G2 549 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3BA6NDS4 549 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 CXorf65A6NEN9 183 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3FA6NER0 549 aaPredicted RBP4.32□□□□□ -1.72
LINC01088-211ENST00000515597 MBD3L5A6NJ08 208 aaPredicted RBP4.32□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3LB9A6J9 549 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 MSI1O43347 362 aaKnown RBP4.32□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3HP0C7X1 549 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 CDK7P50613 346 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 RASSF2P50749 326 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 GALNT3Q14435 633 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 SPARCL1Q14515 664 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 ZNF569Q5MCW4 686 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 Q5PR19 223 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3GQ6DHY5 549 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3CQ6IPX1 549 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 PARM1Q6UWI2 310 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 MORC1Q86VD1 984 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 GPSM1Q86YR5 675 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 CCDC146Q8IYE0 955 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D3Q8IZP1 549 aaPredicted RBP4.32□□□□□ -1.72
LINC01088-211ENST00000515597 C7orf57Q8NEG2 295 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 STYXQ8WUJ0 223 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 EID2BQ96D98 161 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 ARFGAP3Q9NP61 516 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 RNF146Q9NTX7 359 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 CDC23Q9UJX2 597 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 DTX4Q9Y2E6 619 aa4.32□□□□□ -1.72
LINC01088-211ENST00000515597 ERVV-2B6SEH9 535 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 FFAR2O15552 330 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 GAS8-AS1O95177 125 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 IGKV3-20P01619 116 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 STAT1P42224 750 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms