RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ADRA1BP35368 520 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 NNMTP40261 264 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 ZNF143P52747 638 aaPredicted RBP13.15□□□□□ -0.3
CLCN3-210ENST00000515420 ATXN1P54253 815 aaKnown RBP13.15□□□□□ -0.3
CLCN3-210ENST00000515420 AIF1P55008 147 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 SCAPQ12770 1279 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 NFKBIBQ15653 356 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 CDO1Q16878 200 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 C15orf59Q2T9L4 293 aaPredicted RBP13.15□□□□□ -0.3
CLCN3-210ENST00000515420 RNF219Q5W0B1 726 aaPredicted RBP13.15□□□□□ -0.3
CLCN3-210ENST00000515420 PLEKHA7Q6IQ23 1121 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 KIAA1324Q6UXG2 1013 aaKnown RBP13.15□□□□□ -0.3
CLCN3-210ENST00000515420 ZNF783Q6ZMS7 281 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 ZNF571Q7Z3V5 609 aaPredicted RBP13.15□□□□□ -0.3
CLCN3-210ENST00000515420 CYP2U1Q7Z449 544 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 C14orf80Q86SX3 495 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 VPS36Q86VN1 386 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 CIR1Q86X95 450 aaPredicted RBP13.15□□□□□ -0.3
CLCN3-210ENST00000515420 APCDD1Q8J025 514 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 FAM172AQ8WUF8 416 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 ALG14Q96F25 216 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 TRIM11Q96F44 468 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 FEM1AQ9BSK4 669 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 OSBPL2Q9H1P3 480 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 PRSS16Q9NQE7 514 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 PARVAQ9NVD7 372 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 SCML1Q9UN30 329 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 LUC7L2Q9Y383 392 aaKnown RBP13.15□□□□□ -0.3
CLCN3-210ENST00000515420 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLCN3-210ENST00000515420 PI4KAP42356 2102 aa13.15□□□□□ -0.3
CLCN3-210ENST00000515420 EDDM13A0A1B0GTR0 161 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 CXorf51AA0A1B0GTR3 108 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 RTN2O75298 545 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 MYBL1P10243 752 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 RRM1P23921 792 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 MZF1P28698 734 aaPredicted RBP13.14□□□□□ -0.31
CLCN3-210ENST00000515420 CD6P30203 668 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 GGCXP38435 758 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 DHPSP49366 369 aaPredicted RBP13.14□□□□□ -0.31
CLCN3-210ENST00000515420 TPMTP51580 245 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 IRAK1P51617 712 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 HDAC4P56524 1084 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 RPL6Q02878 288 aaKnown RBP13.14□□□□□ -0.31
CLCN3-210ENST00000515420 CREB5Q02930 508 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 TRIM14Q14142 442 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 ARTNQ5T4W7 220 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 C6orf118Q5T5N4 469 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 MANEALQ5VSG8 457 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 PEAR1Q5VY43 1037 aaPredicted RBP13.14□□□□□ -0.31
CLCN3-210ENST00000515420 LYSMD4Q5XG99 296 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 HGSNATQ68CP4 663 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 DCUN1D2Q6PH85 259 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 RABEPKQ7Z6M1 372 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 NETO1Q8TDF5 533 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 FNIP1Q8TF40 1166 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 FOXJ1Q92949 421 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 MCEEQ96PE7 176 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 CNPY3Q9BT09 278 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 ZYG11BQ9C0D3 744 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 ISCUQ9H1K1 167 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 PCED1AQ9H1Q7 454 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 SLC6A17Q9H1V8 727 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 RSPH9Q9H1X1 276 aaPredicted RBP13.14□□□□□ -0.31
CLCN3-210ENST00000515420 WSB2Q9NYS7 404 aaPredicted RBP13.14□□□□□ -0.31
CLCN3-210ENST00000515420 TAS2R14Q9NYV8 317 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 OR12D3Q9UGF7 316 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 SLC25A13Q9UJS0 675 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 VPS28Q9UK41 221 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 CYP8B1Q9UNU6 501 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 OR51B4Q9Y5P0 310 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 DCHS1Q96JQ0 3298 aa13.14□□□□□ -0.31
CLCN3-210ENST00000515420 ILVBLA1L0T0 632 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 DDX3XO00571 662 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLCN3-210ENST00000515420 CCP110O43303 1012 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 NDUFS2O75306 463 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 CNTN5O94779 1100 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 GJB6O95452 261 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 GYPCP04921 128 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 SERPING1P05155 500 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 RHOCP08134 193 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 RPL7AP62424 266 aaKnown RBP13.13□□□□□ -0.31
CLCN3-210ENST00000515420 KRT83P78385 493 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 SFSWAPQ12872 951 aaKnown RBP13.13□□□□□ -0.31
CLCN3-210ENST00000515420 MAMLD1Q13495 774 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 TTC31Q49AM3 519 aaPredicted RBP13.13□□□□□ -0.31
CLCN3-210ENST00000515420 ALFQ53S48 1182 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
CLCN3-210ENST00000515420 SH3PXD2AQ5TCZ1 1133 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 ZNF776Q68DI1 518 aaPredicted RBP13.13□□□□□ -0.31
CLCN3-210ENST00000515420 PHLDB2Q86SQ0 1253 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 SYT12Q8IV01 421 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 FRMD1Q8N878 549 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 ZNF366Q8N895 744 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 C12orf50Q8NA57 414 aaPredicted RBP13.13□□□□□ -0.31
CLCN3-210ENST00000515420 DCAF4L2Q8NA75 395 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 CADM4Q8NFZ8 388 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 OR52K2Q8NGK3 314 aa13.13□□□□□ -0.31
CLCN3-210ENST00000515420 ZNF419Q96HQ0 510 aaPredicted RBP13.13□□□□□ -0.31
CLCN3-210ENST00000515420 C2orf49Q9BVC5 232 aaPredicted RBP13.13□□□□□ -0.31
CLCN3-210ENST00000515420 XPO4Q9C0E2 1151 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms