RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SYT13Q7L8C5 426 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 TRMT11Q7Z4G4 463 aaKnown RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 DAAM2Q86T65 1068 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 CHSY1Q86X52 802 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 DNAAF5Q86Y56 855 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 LGI2Q8N0V4 545 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 RPLP0P6Q8NHW5 317 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 FIBINQ8TAL6 211 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 UCMAQ8WVF2 138 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 ACDQ96AP0 544 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 CAPZA3Q96KX2 299 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 HAPLN3Q96S86 360 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 PRMT1Q99873 361 aaKnown RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 FUT8Q9BYC5 575 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 FAM126AQ9BYI3 521 aaPredicted RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 SIK2Q9H0K1 926 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 EPC1Q9H2F5 836 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 MRPL47Q9HD33 250 aaKnown RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 OGFRQ9NZT2 677 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 CALCOCO1Q9P1Z2 691 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 STIM2Q9P246 746 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 CNOT8Q9UFF9 292 aaKnown RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 RAPGEFL1Q9UHV5 662 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 AMFRQ9UKV5 643 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 HS3ST4Q9Y661 456 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 ALG6Q9Y672 507 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 PATJQ8NI35 1801 aa8.58□□□□□ -1.04
CCL28-204ENST00000514421 MYO18AQ92614 2054 aaKnown RBP8.58□□□□□ -1.04
CCL28-204ENST00000514421 ATG2BQ96BY7 2078 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 TMEM191CA6NGB0 347 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 DRGXA6NNA5 263 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 CCDC188H7C350 402 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 PGRMC1O00264 195 aaKnown RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 NPC1O15118 1278 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 ERLIN1O75477 346 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 KLF8O95600 359 aaPredicted RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 HNRNPLP14866 589 aaKnown RBP eCLIP8.57□□□□□ -1.04
CCL28-204ENST00000514421 CTNNA1P35221 906 aaKnown RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 ATXN1P54253 815 aaKnown RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 MMRN1Q13201 1228 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 DMC1Q14565 340 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 PPP2R5EQ16537 467 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 GEN1Q17RS7 908 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 C5orf22Q49AR2 442 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 EOGTQ5NDL2 527 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 RABGAP1LQ5R372 815 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 SH3PXD2AQ5TCZ1 1133 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 CCDC181Q5TID7 509 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 TTC39BQ5VTQ0 682 aaPredicted RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 PKN3Q6P5Z2 889 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 CCNI2Q6ZMN8 369 aaPredicted RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 ANKS1BQ7Z6G8 1248 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 KIAA0907Q7Z7F0 614 aaPredicted RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 C14orf80Q86SX3 495 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 FAM131BQ86XD5 332 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 MFN1Q8IWA4 741 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 SFTPA1Q8IWL2 248 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 CFAP52Q8N1V2 620 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 CARNMT1Q8N4J0 409 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 CCDC33Q8N5R6 958 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 CAMKK1Q8N5S9 505 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 IL17RCQ8NAC3 791 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 TXNDC5Q8NBS9 432 aaKnown RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 WFIKKN2Q8TEU8 576 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 FAM172AQ8WUF8 416 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.57□□□□□ -1.04
CCL28-204ENST00000514421 SEC14L1Q92503 715 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 NELL1Q92832 810 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 ZNF653Q96CK0 615 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 MYEOVQ96EZ4 313 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 MS4A14Q96JA4 679 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 RPRD1AQ96P16 312 aaPredicted RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 MCEEQ96PE7 176 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 NCAPGQ9BPX3 1015 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 CNPY3Q9BT09 278 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 OSBPL2Q9H1P3 480 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 ANLNQ9NQW6 1124 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 PRMT8Q9NR22 394 aaPredicted RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 ZSCAN32Q9NX65 697 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 ELOVL2Q9NXB9 296 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 KIAA1522Q9P206 1035 aaPredicted RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 THAP10Q9P2Z0 257 aaPredicted RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 LCMT1Q9UIC8 334 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 HCN2Q9UL51 889 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 PACSIN2Q9UNF0 486 aaPredicted RBP8.57□□□□□ -1.04
CCL28-204ENST00000514421 SCINQ9Y6U3 715 aa8.57□□□□□ -1.04
CCL28-204ENST00000514421 TICRRQ7Z2Z1 1910 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 RIF1Q5UIP0 2472 aaKnown RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 CCDC163A0A0D9SF12 145 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 CCDC66A2RUB6 948 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 ANTXRLA6NF34 631 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 H0Y626 953 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 K7ESF4 209 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 KCNK3O14649 394 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 CLDN11O75508 207 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 LUC7L3O95232 432 aaKnown RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 ATP5BP06576 529 aaKnown RBP8.56□□□□□ -1.04
CCL28-204ENST00000514421 RHOXF2BP0C7M4 288 aa8.56□□□□□ -1.04
CCL28-204ENST00000514421 PABPC1P11940 636 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms