RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	THOC3	Q96J01	351 aa	Known RBP	4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	TMEM204	Q9BSN7	226 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	RBM38	Q9H0Z9	239 aa	Known RBP	4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	MRPL44	Q9H9J2	332 aa	Known RBP	4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	PRDM8	Q9NQV8	689 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	SELENON	Q9NZV5	590 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	NDUFAF4	Q9P032	175 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	PKP3	Q9Y446	797 aa		4.62	□□□□□ -1.67
MATR3-223	ENST00000514402	HNRNPR	O43390	633 aa	Known RBP	4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	ACTL6B	O94805	426 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	TNFRSF6B	O95407	300 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	HLA-DQA2	P01906	255 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	CBSL	P0DN79	551 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	T-ENOL	P0DO92	83 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	HOXB9	P17482	250 aa	Predicted RBP	4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	PDIA3	P30101	505 aa	Known RBP	4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	CBS	P35520	551 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	SLC16A2	P36021	539 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	RFX2	P48378	723 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	RHAG	Q02094	409 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	RNASEL	Q05823	741 aa	Known RBP	4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	PPAT	Q06203	517 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	PMPCA	Q10713	525 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	FOXO1	Q12778	655 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	PUM3	Q15397	648 aa	Known RBP	4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	KLHL17	Q6TDP4	642 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	MEPCE	Q7L2J0	689 aa	Known RBP	4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	ANKS1B	Q7Z6G8	1248 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	B4GALNT2	Q8NHY0	566 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	SF3B5	Q9BWJ5	86 aa	Known RBP	4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	SORBS1	Q9BX66	1292 aa	Known RBP	4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	MAP6D1	Q9H9H5	199 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	PNRC2	Q9NPJ4	139 aa	Known RBP	4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	ZNF580	Q9UK33	172 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	SLC4A4	Q9Y6R1	1079 aa		4.61	□□□□□ -1.67
MATR3-223	ENST00000514402	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	TMEM247	A6NEH6	219 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	CXorf65	A6NEN9	183 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	SERPINB3	P29508	390 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	CDKN2A	P42771	156 aa	Known RBP	4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	GALNT1	Q10472	559 aa	Predicted RBP	4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	UBE4A	Q14139	1066 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	PLK5	Q496M5	336 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	SYCP2L	Q5T4T6	812 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	TANGO2	Q6ICL3	276 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	AAGAB	Q6PD74	315 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	MYLK4	Q86YV6	388 aa	Predicted RBP	4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	SLC25A41	Q8N5S1	370 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	SAMD3	Q8N6K7	520 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	BICD2	Q8TD16	824 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	CLEC4C	Q8WTT0	213 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	CAMK1G	Q96NX5	476 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	PIGS	Q96S52	555 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	RMDN3	Q96TC7	470 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	HIPK2	Q9H2X6	1198 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	PABPC3	Q9H361	631 aa	Known RBP	4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	PDE11A	Q9HCR9	933 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	PLK2	Q9NYY3	685 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	DAPP1	Q9UN19	280 aa		4.6	□□□□□ -1.67
MATR3-223	ENST00000514402	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402		H0YGN5	161 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	MCM2	P49736	904 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	ROR2	Q01974	943 aa	Known RBP	4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	BRD3	Q15059	726 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	NUGGC	Q68CJ6	796 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	DGAT2L7P	Q6IED9	249 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	KIAA1161	Q6NSJ0	714 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	TMEM200A	Q86VY9	491 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	ADHFE1	Q8IWW8	467 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	OR1N1	Q8NGS0	311 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	BRD8	Q9H0E9	1235 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	ELAC1	Q9H777	363 aa	Known RBP	4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	PLCB1	Q9NQ66	1216 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	SLC22A11	Q9NSA0	550 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	HIF1AN	Q9NWT6	349 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	DACT1	Q9NYF0	836 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	TBC1D14	Q9P2M4	693 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	BAG5	Q9UL15	447 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	PCDHA7	Q9UN72	937 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	LZTS1	Q9Y250	596 aa		4.59	□□□□□ -1.67
MATR3-223	ENST00000514402	LACTBL1	A8MY62	500 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	ACKR2	O00590	384 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	HEXIM1	O94992	359 aa	Known RBP	4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	CSTB	P04080	98 aa	Known RBP	4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	SERPINA4	P29622	427 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	BLMH	Q13867	455 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	MORC3	Q14149	939 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	DCTN1	Q14203	1278 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	RPS6KA2	Q15349	733 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	KLHL22	Q53GT1	634 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	ENTPD8	Q5MY95	495 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	RUSC1-AS1	Q66K80	236 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	CAMK1D	Q8IU85	385 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	IP6K1	Q92551	441 aa		4.58	□□□□□ -1.68
MATR3-223	ENST00000514402	INPP5D	Q92835	1189 aa		4.58	□□□□□ -1.68

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